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  5. Als_g18245

Als_g18245 (SPD1)


Aliases : SPD1

Description : not classified & original description: none


Gene families : OG0001410 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001410_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g18245
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00151130 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT1G33290 No alias P-loop containing nucleoside triphosphate hydrolases... 0.05 OrthoFinder output from all 47 species
AT1G73170 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
Adi_g088713 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g108757 SPD1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g112939 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g02605 SPD1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g07290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71144.t1 SPD1, Aspi01Gene71144 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.34G074300.1 SPD1, Ceric.34G074300 not classified & original description: pacid=50622982... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001215.19 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g01740 SPD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06628 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g11178 SPD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os06g06190.1 LOC_Os06g06190 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g10640.1 LOC_Os12g10640 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Len_g18297 SPD1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10427944g0010 SPD1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp5g22990.1 SPD1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g02253 SPD1 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ore_g10530 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g21651 SPD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08230 SPD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13769 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo410877 SPD1 No description available 0.02 OrthoFinder output from all 47 species
Solyc12g014150.3.1 Solyc12g014150 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g26580 SPD1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e030045_P004 Zm00001e030045 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR045735 Spore_III_AA_AAA+_ATPase 207 333
No external refs found!