Als_g18887


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g18887

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00067180 EMB2261,... Pentatricopeptide repeat-containing protein At2g46050,... 0.01 OrthoFinder output from all 47 species
Adi_g003740 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035616 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02649 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g03141 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03179 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04818 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05076 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05933 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06199 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06261 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06361 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06398 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07035 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07067 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07235 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07262 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07375 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07386 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15385 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18037 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18398 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18506 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18809 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18939 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19109 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19152 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g29283 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30425 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30533 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30585 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30736 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30769 MEF21 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g39900 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g47255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55222 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g55801 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07964 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g18696 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g28209 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g36101 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37348 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g37590 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene14256.t1 Aspi01Gene14256 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24209.t1 VAC1, ECB2,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene55895.t1 Aspi01Gene55895 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene69669.t1 CRR22, Aspi01Gene69669 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0003.g007645 OTP86 not classified & original description: CDS=47-2665 0.06 OrthoFinder output from all 47 species
Azfi_s0011.g012535 No alias not classified & original description: CDS=1-2328 0.03 OrthoFinder output from all 47 species
Azfi_s0070.g036726 REME1 not classified & original description: CDS=1-1386 0.06 OrthoFinder output from all 47 species
Azfi_s0073.g037188 CRR22 not classified & original description: CDS=1-1875 0.12 OrthoFinder output from all 47 species
Azfi_s0658.g081287 CRR22 not classified & original description: CDS=1-1986 0.03 OrthoFinder output from all 47 species
Cba_g02715 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g75784 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.11G081200.1 Ceric.11G081200 not classified & original description: pacid=50594979... 0.03 OrthoFinder output from all 47 species
Ceric.28G037300.1 Ceric.28G037300 not classified & original description: pacid=50570602... 0.02 OrthoFinder output from all 47 species
Ceric.29G039600.1 Ceric.29G039600 not classified & original description: pacid=50625761... 0.04 OrthoFinder output from all 47 species
Ceric.32G007600.1 Ceric.32G007600 not classified & original description: pacid=50597667... 0.04 OrthoFinder output from all 47 species
Ceric.34G000500.1 Ceric.34G000500 not classified & original description: pacid=50623432... 0.02 OrthoFinder output from all 47 species
Dac_g15088 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g09752 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g43120 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g45940 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06009 OTP84 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g16748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os07g13540.1 EMB2261, LOC_Os07g13540 Pentatricopeptide repeat-containing protein At2g22070... 0.07 OrthoFinder output from all 47 species
Len_g04269 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g56497 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g06655 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06706 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31337 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g07070 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g07302 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g15699 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g34904 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g09779 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12577 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13036 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g13384 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13437 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14457 DOT4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g27565 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g60035 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63503 DOT4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63875 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07606 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g22255 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g55046 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g56308 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007796 No alias not classified & original description: CDS=1-2022 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0125.g021689 No alias S-adenosyl methionine transporter *(GOSAMT) & original... 0.01 OrthoFinder output from all 47 species
Sam_g02113 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g02929 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g06558 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g12009 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14278 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17751 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g26535 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27568 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g29063 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g29135 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g30162 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g35469 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g36161 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g39876 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50908 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Smo173139 VAC1, ECB2, ATECB2 Pentatricopeptide repeat-containing protein At4g13650... 0.01 OrthoFinder output from all 47 species
Tin_g01122 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g04184 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g26634 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g35681 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g35685 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 89 110
IPR002885 Pentatricopeptide_repeat 13 60
No external refs found!