Als_g18934


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g18934

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00075660 No alias Pentatricopeptide repeat-containing protein At2g33680... 0.03 OrthoFinder output from all 47 species
AMTR_s00045p00048330 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g53360,... 0.03 OrthoFinder output from all 47 species
AT1G17630 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g002304 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g005281 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g045979 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g048224 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g47897 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24332 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g36540 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g03485 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06645 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g06803 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g10468 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g30697 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30723 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g58106 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g22581 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16519 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16780 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23933 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g36072 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g63625 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67869 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g68032 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g69999 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g70075 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene04308.t1 Aspi01Gene04308 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30841.t1 OTP82, Aspi01Gene30841 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0117.g046569 No alias not classified & original description: CDS=1-2520 0.06 OrthoFinder output from all 47 species
Azfi_s0228.g059086 No alias not classified & original description: CDS=12-1547 0.05 OrthoFinder output from all 47 species
Azfi_s0292.g063413 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2286 0.05 OrthoFinder output from all 47 species
Azfi_s1721.g106134 CRR22 not classified & original description: CDS=1-1431 0.05 OrthoFinder output from all 47 species
Cba_g03800 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05295 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g06759 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07168 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g11909 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g13544 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g13662 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20154 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20419 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g20479 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g20483 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20517 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20832 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g26054 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g26721 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29910 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g32896 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g35158 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g38142 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g56830 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67060 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67463 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g74968 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g76054 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g78717 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.07G042200.1 Ceric.07G042200 not classified & original description: pacid=50626031... 0.06 OrthoFinder output from all 47 species
Ceric.34G057600.1 Ceric.34G057600 not classified & original description: pacid=50623573... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001657.6 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g36768 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g04041 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g18210 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g19445 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g22981 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g29816 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g35988 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g38858 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g43235 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g43324 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g03570 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g05686 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g50575 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01003766001 LPA66 Pentatricopeptide repeat-containing protein At1g08070,... 0.03 OrthoFinder output from all 47 species
LOC_Os08g28830.1 LOC_Os08g28830 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Lfl_g09042 OTP80 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_785826g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Mp8g01790.1 No alias ssDNA-binding protein (OSB) 0.02 OrthoFinder output from all 47 species
Msp_g11341 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g29094 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g34234 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g48395 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g19105 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g41038 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g23126 EMB2261 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43611 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g16345 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g30070 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g07617 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g22472 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g24777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18026 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21545 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g44754 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g44998 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g55588 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17792 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g21829 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e039026_P001 OTP82, Zm00001e039026 Pentatricopeptide repeat-containing protein At5g48910... 0.03 OrthoFinder output from all 47 species
Zm00001e039305_P001 Zm00001e039305 RNA editing factor (MEF13) 0.04 OrthoFinder output from all 47 species
Zm00001e041246_P001 Zm00001e041246 Pentatricopeptide repeat-containing protein At3g53360,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 2 19
IPR002885 Pentatricopeptide_repeat 98 121
IPR002885 Pentatricopeptide_repeat 127 150
IPR002885 Pentatricopeptide_repeat 22 70
No external refs found!