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  5. Als_g19115

Als_g19115


Description : not classified & original description: none


Gene families : OG0000642 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000642_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g19115

Target Alias Description ECC score Gene Family Method Actions
AT5G46870 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 OrthoFinder output from all 47 species
Adi_g022185 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g115931 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g16560 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14819 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g22163 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g37925 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03086 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene57383.t1 Aspi01Gene57383 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g14713 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.05G062300.1 Ceric.05G062300 not classified & original description: pacid=50578128... 0.05 OrthoFinder output from all 47 species
Dac_g13809 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g07449 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g09629 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23747 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g02086 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04385 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19804 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01011624001 No alias Binding partner of ACD11 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os03g50560.1 LOC_Os03g50560 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
LOC_Os04g54870.1 LOC_Os04g54870 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Len_g55926 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04564 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g03642 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Pnu_g30567 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g00654 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g07450 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07486 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g11660 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc08g076530.3.1 Solyc08g076530 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc10g076890.3.1 Solyc10g076890 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g04495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g38160 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g05834 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e012039_P002 Zm00001e012039 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
CC GO:0070652 HAUS complex IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 8 67
No external refs found!