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  5. Als_g20028

Als_g20028 (BMY5, BAM6)


Aliases : BMY5, BAM6

Description : EC_3.2 glycosylase & original description: none


Gene families : OG0000477 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000477_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g20028
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00098p00153370 RAM1, BMY1,... Carbohydrate metabolism.starch... 0.02 OrthoFinder output from all 47 species
Adi_g082769 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g35885 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05980 BMY8, BAM3, CT-BMY EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Gb_35348 BMY8, BAM3, CT-BMY beta amylase 0.03 OrthoFinder output from all 47 species
LOC_Os10g41550.1 BMY8, BAM3,... beta amylase 0.04 OrthoFinder output from all 47 species
Len_g08375 BMY8, BAM3, CT-BMY EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g22613 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g30972 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
MA_124514g0010 BAM1, BMY7, TR-BAMY beta amylase 0.03 OrthoFinder output from all 47 species
Msp_g13123 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19249 BMY8, BAM3, CT-BMY EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19840 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g067660.3.1 BAM9, BMY3,... beta amylase 0.03 OrthoFinder output from all 47 species
Zm00001e002383_P001 BMY8, BAM3,... beta amylase 0.02 OrthoFinder output from all 47 species
Zm00001e026128_P001 BMY8, BAM3,... beta amylase 0.02 OrthoFinder output from all 47 species
Zm00001e037830_P001 BMY8, BAM3,... beta amylase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEA Interproscan
MF GO:0016161 beta-amylase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0009975 cyclase activity IEP HCCA
MF GO:0009976 tocopherol cyclase activity IEP HCCA
InterPro domains Description Start Stop
IPR001554 Glyco_hydro_14 197 605
No external refs found!