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  5. Als_g20049

Als_g20049


Description : UMF23-type solute transporter & original description: none


Gene families : OG0000069 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000069_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g20049

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00058430 evm_27.TU.AmTr_v1... Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00041p00157100 evm_27.TU.AmTr_v1... Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Adi_g026166 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g29956 No alias UMF23-type solute transporter & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g33772 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16210 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Als_g61139 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07910 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34088.t2 Aspi01Gene34088 UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40207.t1 Aspi01Gene40207 UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40218.t1 Aspi01Gene40218 UMF23-type solute transporter & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene51117.t1 Aspi01Gene51117 UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0142.g051380 No alias UMF23-type solute transporter & original description: CDS=1-1827 0.05 OrthoFinder output from all 47 species
Cba_g32326 No alias UMF23-type solute transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G016400.1 Ceric.03G016400 UMF23-type solute transporter & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g06993 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14824 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g39991 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g01425 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24124 No alias UMF23-type solute transporter & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01008083001 No alias Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01008084001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01033076001 No alias Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os03g47810.1 LOC_Os03g47810 anion transporter (Fabaceae-N70) 0.05 OrthoFinder output from all 47 species
LOC_Os08g15450.1 LOC_Os08g15450 anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species
LOC_Os08g42010.1 LOC_Os08g42010 anion transporter (Fabaceae-N70) 0.03 OrthoFinder output from all 47 species
Lfl_g03352 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03438 No alias UMF23-type solute transporter & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g12597 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g34692 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
MA_10427226g0010 No alias anion transporter (Fabaceae-N70) 0.03 OrthoFinder output from all 47 species
MA_18517g0010 No alias anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species
MA_2615g0010 No alias anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species
MA_473068g0010 No alias anion transporter (Fabaceae-N70) 0.03 OrthoFinder output from all 47 species
MA_6723g0010 No alias anion transporter (Fabaceae-N70) 0.03 OrthoFinder output from all 47 species
MA_7398127g0010 No alias anion transporter (Fabaceae-N70) 0.04 OrthoFinder output from all 47 species
Mp2g06490.1 No alias anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species
Mp4g12380.1 No alias anion transporter (Fabaceae-N70) 0.03 OrthoFinder output from all 47 species
Msp_g02835 No alias UMF23-type solute transporter & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g32262 No alias UMF23-type solute transporter & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g41966 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06788 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g28611 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g32537 No alias UMF23-type solute transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g36448 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10746 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11993 No alias UMF23-type solute transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g29994 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001188 No alias UMF23-type solute transporter & original description: CDS=1-4125 0.03 OrthoFinder output from all 47 species
Sam_g28803 No alias UMF23-type solute transporter & original description: none 0.04 OrthoFinder output from all 47 species
Smo166510 No alias Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc01g111350.3.1 Solyc01g111350 anion transporter (Fabaceae-N70) 0.03 OrthoFinder output from all 47 species
Solyc05g055540.3.1 Solyc05g055540 anion transporter (Fabaceae-N70) 0.04 OrthoFinder output from all 47 species
Solyc09g008370.1.1 Solyc09g008370 anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species
Solyc11g008180.1.1 Solyc11g008180 anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species
Solyc11g008200.2.1 Solyc11g008200 anion transporter (Fabaceae-N70) 0.03 OrthoFinder output from all 47 species
Spa_g21551 No alias UMF23-type solute transporter & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g52118 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g16333 No alias UMF23-type solute transporter & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g19338 No alias UMF23-type solute transporter & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g26859 No alias UMF23-type solute transporter & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e003676_P002 Zm00001e003676 anion transporter (Fabaceae-N70) 0.05 OrthoFinder output from all 47 species
Zm00001e006026_P001 Zm00001e006026 anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species
Zm00001e008361_P001 Zm00001e008361 anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species
Zm00001e011367_P001 Zm00001e011367 anion transporter (Fabaceae-N70) 0.03 OrthoFinder output from all 47 species
Zm00001e033020_P001 Zm00001e033020 anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR010658 Nodulin-like 5 251
No external refs found!