Aliases : PAM68
Description : protein involved in PS-II assembly *(PAM68) & original description: none
Gene families : OG0005725 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005725_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pnu_g12314 | |
| Cluster | HCCA: Cluster_99 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT4G19100 | PAM68 | Protein of unknown function (DUF3464) | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g112212 | PAM68 | protein involved in PS-II assembly *(PAM68) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Cre07.g329000 | PAM68 | Photosynthesis.photophosphorylation.photosystem... | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g28925 | PAM68 | protein involved in PS-II assembly *(PAM68) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g02243 | PAM68 | protein involved in PS-II assembly *(PAM68) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g07607 | PAM68 | protein involved in PS-II assembly *(PAM68) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g19463 | PAM68 | protein involved in PS-II assembly *(PAM68) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c21_19650V3.1 | PAM68, Pp3c21_19650 | Protein of unknown function (DUF3464) | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g02352 | PAM68 | protein involved in PS-II assembly *(PAM68) & original... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006413 | translational initiation | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0015299 | obsolete solute:proton antiporter activity | IEP | HCCA |
| BP | GO:0015977 | carbon fixation | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0016831 | carboxy-lyase activity | IEP | HCCA |
| MF | GO:0016984 | ribulose-bisphosphate carboxylase activity | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR021855 | PAM68-like | 91 | 216 |
| No external refs found! |
