Pnu_g12352

Description : RING-H2-class CTL-subclass E3 ubiquitin ligase & original description: none

Gene families : OG0000374 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000374_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pnu_g12352

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00045p00133270	evm_27.TU.AmTr_v1...	No description available	0.03	OrthoFinder output from all 47 species
AMTR_s00046p00058640	evm_27.TU.AmTr_v1...	Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza...	0.03	OrthoFinder output from all 47 species
AT3G15070	No alias	RING/U-box superfamily protein	0.02	OrthoFinder output from all 47 species
Azfi_s0109.g045337	No alias	not classified & original description: CDS=372-1700	0.03	OrthoFinder output from all 47 species
Ehy_g12443	No alias	RING-H2-class CTL-subclass E3 ubiquitin ligase &...	0.03	OrthoFinder output from all 47 species
Ehy_g19115	No alias	RING-H2-class CTL-subclass E3 ubiquitin ligase &...	0.03	OrthoFinder output from all 47 species
GSVIVT01014254001	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.03	OrthoFinder output from all 47 species
GSVIVT01035519001	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.04	OrthoFinder output from all 47 species
Msp_g15773	No alias	regulatory E3 ubiquitin ligase (MREL/JUL) of microtubule...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

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Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
BP	GO:0008610	lipid biosynthetic process	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001841	Znf_RING	846	888

External Links

No external refs found!