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  5. Als_g20581

Als_g20581 (YCF10)


Aliases : YCF10

Description : regulatory protein *(YCF10) of non-photochemical quenching & original description: none


Gene families : OG0002952 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002952_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g20581
Cluster HCCA: Cluster_182

Target Alias Description ECC score Gene Family Method Actions
ATCG00530 YCF10 CemA-like proton extrusion protein-related 0.16 OrthoFinder output from all 47 species
Aev_g16178 YCF10 regulatory protein *(YCF10) of non-photochemical... 0.16 OrthoFinder output from all 47 species
Ala_g06422 YCF10 regulatory protein *(YCF10) of non-photochemical... 0.03 OrthoFinder output from all 47 species
Aob_g35850 YCF10 regulatory protein *(YCF10) of non-photochemical... 0.1 OrthoFinder output from all 47 species
Ceric.05G050100.1 YCF10, Ceric.05G050100 regulatory protein *(YCF10) of non-photochemical... 0.16 OrthoFinder output from all 47 species
Ceric.16G018200.1 YCF10, Ceric.16G018200 regulatory protein *(YCF10) of non-photochemical... 0.09 OrthoFinder output from all 47 species
Ceric.33G022600.1 YCF10, Ceric.33G022600 regulatory protein *(YCF10) of non-photochemical... 0.07 OrthoFinder output from all 47 species
Ceric.38G006900.1 YCF10, Ceric.38G006900 regulatory protein *(YCF10) of non-photochemical... 0.16 OrthoFinder output from all 47 species
Dcu_g22332 YCF10 regulatory protein *(YCF10) of non-photochemical... 0.11 OrthoFinder output from all 47 species
GSVIVT01017636001 YCF10 Chloroplast envelope membrane protein OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
GSVIVT01029875001 YCF10 Chloroplast envelope membrane protein OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
GSVIVT01030620001 YCF10 Chloroplast envelope membrane protein OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
GSVIVT01037398001 YCF10 Chloroplast envelope membrane protein OS=Manihot esculenta 0.03 OrthoFinder output from all 47 species
Gb_18347 No alias Chloroplast envelope membrane protein OS=Ginkgo biloba... 0.08 OrthoFinder output from all 47 species
LOC_Os02g24598.1 YCF10, LOC_Os02g24598 Chloroplast envelope membrane protein OS=Oryza sativa... 0.17 OrthoFinder output from all 47 species
Len_g13439 YCF10 regulatory protein *(YCF10) of non-photochemical... 0.04 OrthoFinder output from all 47 species
Lfl_g40541 YCF10 regulatory protein *(YCF10) of non-photochemical... 0.2 OrthoFinder output from all 47 species
Ore_g07353 YCF10 regulatory protein *(YCF10) of non-photochemical... 0.12 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002243 YCF10 regulatory protein *(YCF10) of non-photochemical... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016168 chlorophyll binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0019684 photosynthesis, light reaction IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR004282 CemA 279 506
No external refs found!