Aliases : CYCT1;4
Description : regulatory component *(CYCT) of CTDK-I polymerase-II kinase complex & original description: none
Gene families : OG0000467 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000467_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Als_g20791 | |
| Cluster | HCCA: Cluster_20 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00059p00215360 | CYCT1;4,... | RNA biosynthesis.RNA polymerase II-dependent... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g080715 | CYCT1;4 | regulatory component *(CYCT) of CTDK-I polymerase-II... | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g21613 | CYCT1;4 | regulatory component *(CYCT) of CTDK-I polymerase-II... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g57178 | CYCT1;4 | regulatory protein *(CYCT) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g06020 | CYCT1;4 | regulatory component *(CYCT) of CTDK-I polymerase-II... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g04927 | CYCT1;4 | regulatory protein *(CYCT) of cell cycle & original... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g28766 | CYCT1;4 | regulatory component *(CYCT) of CTDK-I polymerase-II... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g32371 | CYCT1;4 | regulatory component *(CYCT) of CTDK-I polymerase-II... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.32G005000.1 | CYCT1;4, Ceric.32G005000 | regulatory protein *(CYCT) of cell cycle & original... | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01013628001 | CYCT1;4 | Cell cycle.regulation.cyclins.CYCT-type cyclin | 0.02 | OrthoFinder output from all 47 species | |
| Gb_08732 | CYCT1;4 | cyclin (CYCT) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g30020.2 | CYCT1;4, LOC_Os12g30020 | cyclin (CYCT). regulatory component of CTDK-I... | 0.04 | OrthoFinder output from all 47 species | |
| MA_176177g0010 | CYCT1;4 | Cyclin-T1-5 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| MA_8507811g0010 | No alias | cyclin (CYCT) | 0.02 | OrthoFinder output from all 47 species | |
| Mp3g00720.1 | CYCT1;4 | cyclin (CYCT). regulatory component of CTDK-I... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g12236 | CYCT1;4 | regulatory component *(CYCT) of CTDK-I polymerase-II... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g17325 | CYCT1;4 | regulatory protein *(CYCT) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g032480.3.1 | CYCT1;4, Solyc07g032480 | cyclin (CYCT) | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g11581 | CYCT1;4 | regulatory component *(CYCT) of CTDK-I polymerase-II... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0004813 | alanine-tRNA ligase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| CC | GO:0005956 | protein kinase CK2 complex | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006419 | alanyl-tRNA aminoacylation | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| MF | GO:0019207 | kinase regulator activity | IEP | HCCA |
| MF | GO:0019887 | protein kinase regulator activity | IEP | HCCA |
| MF | GO:0030234 | enzyme regulator activity | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
| CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0098772 | molecular function regulator activity | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| CC | GO:1902554 | serine/threonine protein kinase complex | IEP | HCCA |
| CC | GO:1902911 | protein kinase complex | IEP | HCCA |
| CC | GO:1990234 | transferase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006671 | Cyclin_N | 38 | 169 |
| No external refs found! |
