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  5. Pnu_g12397

Pnu_g12397


Description : not classified & original description: none


Gene families : OG0000540 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000540_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g12397
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00243080 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G21326 No alias VQ motif-containing protein 0.03 OrthoFinder output from all 47 species
AT3G18690 MKS1 MAP kinase substrate 1 0.03 OrthoFinder output from all 47 species
Adi_g081271 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g128825 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g00611 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22625 MKS1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g31979 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g39767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28143.t1 Aspi01Gene28143 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene36396.t1 Aspi01Gene36396 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36397.t1 Aspi01Gene36397 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36398.t1 Aspi01Gene36398 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29938 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g01989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23425 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27081 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os02g33600.1 MKS1, LOC_Os02g33600 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g34050.1 LOC_Os04g34050 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g40090.1 MKS1, LOC_Os06g40090 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_63904g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g19744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07983 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g07005 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004079 No alias not classified & original description: CDS=1-978 0.03 OrthoFinder output from all 47 species
Solyc11g005720.1.1 MKS1, Solyc11g005720 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e011491_P001 Zm00001e011491 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e037399_P001 MKS1, Zm00001e037399 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e040850_P001 Zm00001e040850 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
CC GO:0031262 Ndc80 complex IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR008889 VQ 42 64
No external refs found!