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  5. Als_g21834

Als_g21834 (ATSYP52, SYP52)


Aliases : ATSYP52, SYP52

Description : Qc-type SYP5-group component of SNARE membrane fusion complex & original description: none


Gene families : OG0001545 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001545_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g21834
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Cre17.g709350 ATSYP51, SYP51 Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder output from all 47 species
GSVIVT01005339001 No alias No description available 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 179 230
No external refs found!