Description : LIM-type transcription factor & original description: none
Gene families : OG0001474 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001474_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Als_g22072 | |
| Cluster | HCCA: Cluster_71 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Als_g44813 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g13101 | WLIM1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g16417 | No alias | LIM-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g43336 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aop_g19676 | WLIM1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g20012 | WLIM1 | LIM-type transcription factor & original description: none | 0.19 | OrthoFinder output from all 47 species | |
| Aop_g31194 | No alias | LIM-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g68155 | No alias | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g05833 | No alias | LIM-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g10224 | No alias | LIM-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dac_g25168 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dac_g25919 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Dac_g26042 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g27903 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g23314 | No alias | LIM-type transcription factor & original description: none | 0.14 | OrthoFinder output from all 47 species | |
| Dcu_g33087 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g28505 | No alias | LIM-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g07060 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g18614 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g61820 | No alias | LIM-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g07899 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g11856 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g23761 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g37521 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g51058 | No alias | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g25459 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g33023 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g42918 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g42270 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g43003 | No alias | LIM-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0003779 | actin binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
| MF | GO:0008289 | lipid binding | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
