Aliases : At-RSZ22a, RSZ22a
Description : RNA splicing factor *(RSZ21/22) & original description: none
Gene families : OG0001173 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001173_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Als_g22485 | |
| Cluster | HCCA: Cluster_205 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00019p00154210 | At-RSZ22a,... | RNA processing.RNA splicing.spliceosome-associated... | 0.02 | OrthoFinder output from all 47 species | |
| AT2G24590 | At-RSZ22a, RSZ22a | RNA recognition motif and CCHC-type zinc finger domains... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g019585 | At-RSZ22a, RSZ22a | RNA splicing factor *(RSZ21/22) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g073373 | At-SR34, SRP34,... | RNA splicing factor *(RSZ21/22) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g06419 | RSZ21, At-RSZ21,... | RNA splicing factor *(RSZ21/22) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g07876 | At-RSZ22a, RSZ22a | RNA splicing factor *(RSZ21/22) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g19642 | RSZ21, At-RSZ21,... | RNA splicing factor *(RSZ21/22) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g01672 | At-RSZ22a, RSZ22a | RNA splicing factor *(RSZ21/22) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e023726_P001 | At-RSZ22a,... | RSZ21/22 RNA splicing factor | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0006643 | membrane lipid metabolic process | IEP | HCCA |
| BP | GO:0006665 | sphingolipid metabolic process | IEP | HCCA |
| BP | GO:0006672 | ceramide metabolic process | IEP | HCCA |
| BP | GO:0009056 | catabolic process | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | HCCA |
| MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | HCCA |
| MF | GO:0019899 | enzyme binding | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| MF | GO:0031625 | ubiquitin protein ligase binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044255 | cellular lipid metabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | HCCA |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| MF | GO:0071949 | FAD binding | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
| No external refs found! |
