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  5. Als_g22584

Als_g22584 (ATHB40, HB40, HB-5)


Aliases : ATHB40, HB40, HB-5

Description : HD-ZIP I/II-type transcription factor & original description: none


Gene families : OG0000129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g22584

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00215130 ATHB5, ATHB-5,... RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
AT1G26960 AtHB23, HB23 homeobox protein 23 0.02 OrthoFinder output from all 47 species
AT4G36740 ATHB40, HB40, HB-5 homeobox protein 40 0.02 OrthoFinder output from all 47 species
Als_g23746 ATHB5, ATHB-5, HB5 HD-ZIP I/II-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Als_g57801 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene32029.t1 ATHB5, ATHB-5,... HD-ZIP I/II-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene58187.t1 Aspi01Gene58187 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g02564 ATHB16, HB16, ATHB-16 regulatory protein *(LMI1) of floral meristem identity... 0.03 OrthoFinder output from all 47 species
Dde_g17794 ATHB5, ATHB-5, HB5 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g03578 ATHB40, HB40, HB-5 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
LOC_Os09g35910.1 HB-7, ATHB-7,... transcription factor (HD-ZIP I/II) 0.04 OrthoFinder output from all 47 species
LOC_Os10g23090.1 ATHB5, ATHB-5,... transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
MA_19453g0040 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
MA_19453g0050 ATHB1, ATHB-1,... Homeobox-leucine zipper protein HAT5 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Pir_g10194 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pnu_g06112 ATHB13 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0091.g018854 HB6, ATHB6 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0138.g022579 ATHB21, HB21, HB-2 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e000775_P001 ATHB40, HB40,... transcription factor (HD-ZIP I/II) 0.01 OrthoFinder output from all 47 species
Zm00001e034785_P001 HB-12, ATHB-12,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000228 nuclear chromosome IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 79 132
No external refs found!