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  5. Als_g22635

Als_g22635 (ABCB19, ATABCB19,...)


Aliases : ABCB19, ATABCB19, MDR1, MDR11, ATPGP19, ATMDR1, ATMDR11, PGP19

Description : subfamily ABCB transporter & original description: none


Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g22635
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00108620 PGP11,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
AMTR_s00045p00109790 PGP11,... No description available 0.03 OrthoFinder output from all 47 species
AT3G62150 PGP21 P-glycoprotein 21 0.04 OrthoFinder output from all 47 species
Ala_g11046 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g15862 ATPGP4, PGP4, ABCB4, MDR4 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g27372 ABCB19,... subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g29011 PGP10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33590 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene12320.t2 PGP2, Aspi01Gene12320 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene28299.t1 Aspi01Gene28299 subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene45621.t1 PGP11, Aspi01Gene45621 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g00972 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46023 PGP13 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20264 No alias subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g28462 PGP2 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01028256001 PGP11 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Gb_10211 No alias subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Gb_33057 ABCB19,... subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Gb_33058 ABCB19,... subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Gb_36497 No alias subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Gb_36503 No alias serine carboxypeptidase. subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Gb_38960 PGP11 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
LOC_Os01g18670.1 PGP21, LOC_Os01g18670 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
LOC_Os01g35030.1 PGP11, LOC_Os01g35030 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
LOC_Os01g50100.1 PGP11, LOC_Os01g50100 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
LOC_Os02g09720.1 LOC_Os02g09720 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Len_g04845 PGP20 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Len_g57621 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10739 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
MA_10134765g0010 PGP11 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_102299g0010 No alias Putative multidrug resistance protein OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
MA_10280832g0010 PGP11 ABC transporter B family member 7 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_10432169g0010 PGP11 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
MA_18863g0020 PGP3, MDR3 ABC transporter B family member 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_636449g0010 No alias subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
MA_6958g0010 PGP21 ABC transporter B family member 21 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_79399g0010 No alias Putative multidrug resistance protein OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
MA_83806g0010 No alias subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
MA_9148200g0010 No alias ABC transporter B family member 15 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp2g11920.1 ABCB19,... subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Mp2g21430.1 No alias subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Nbi_g02494 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18266 ABCB19,... subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g29613 PGP11 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g26459 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31570 PGP2 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0054.g014291 PGP2 subfamily ABCB transporter & original description: CDS=1-4248 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0111.g020710 ABCB19,... not classified & original description: CDS=1-1380 0.03 OrthoFinder output from all 47 species
Sam_g03287 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g34538 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48720 No alias subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Smo230688 ABCB19,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Smo408755 No alias Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Solyc06g009280.1.1 PGP11, Solyc06g009280 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Solyc06g009290.4.1 PGP21, Solyc06g009290 subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Tin_g06701 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08424 PGP11 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g21567 No alias subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e028117_P001 PGP11, Zm00001e028117 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Zm00001e041087_P002 Zm00001e041087 subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 1059 1207
IPR011527 ABC1_TM_dom 722 991
IPR011527 ABC1_TM_dom 68 341
IPR003439 ABC_transporter-like_ATP-bd 410 558
No external refs found!