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  5. Als_g22674

Als_g22674


Description : not classified & original description: none


Gene families : OG0000144 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000144_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g22674
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00168800 evm_27.TU.AmTr_v1... Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
AT1G12440 No alias A20/AN1-like zinc finger family protein 0.03 OrthoFinder output from all 47 species
AT2G27580 No alias A20/AN1-like zinc finger family protein 0.03 OrthoFinder output from all 47 species
AT2G36320 No alias A20/AN1-like zinc finger family protein 0.02 OrthoFinder output from all 47 species
AT4G22820 No alias A20/AN1-like zinc finger family protein 0.02 OrthoFinder output from all 47 species
Adi_g009203 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22446 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06223 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g03702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07448 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g24458 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g25513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01025305001 No alias Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
LOC_Os03g57890.1 LOC_Os03g57890 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
LOC_Os06g41010.1 LOC_Os06g41010 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
Len_g29468 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g21543 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g22045 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp4g23510.1 No alias Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
Nbi_g20480 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g04090 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g20395 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g37939 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g46407 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53665 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0045.g013142 No alias not classified & original description: CDS=1-786 0.03 OrthoFinder output from all 47 species
Sam_g11115 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g37319 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc11g061770.2.1 Solyc11g061770 Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
Solyc12g100060.1.1 Solyc12g100060 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
Spa_g02339 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29996 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g03099 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e025028_P001 Zm00001e025028 Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
Zm00001e034520_P001 Zm00001e034520 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
BP GO:0034227 tRNA thio-modification IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR000058 Znf_AN1 157 192
IPR002653 Znf_A20 22 45
No external refs found!