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  5. Als_g23594

Als_g23594


Description : associated component *(AFR) of histone deacetylase machineries & original description: none


Gene families : OG0001072 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001072_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g23594

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00143240 evm_27.TU.AmTr_v1... Chromatin organisation.histone modifications.histone... 0.03 OrthoFinder output from all 47 species
Adi_g002827 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Adi_g009990 No alias associated component *(AFR) of histone deacetylase... 0.04 OrthoFinder output from all 47 species
Adi_g016707 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Adi_g042772 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Adi_g042773 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Adi_g046047 No alias associated component *(AFR) of histone deacetylase... 0.06 OrthoFinder output from all 47 species
Adi_g115577 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Aob_g03263 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Aop_g26979 No alias associated component *(AFR) of histone deacetylase... 0.04 OrthoFinder output from all 47 species
Azfi_s0214.g058321 NTMC2T5.1, NTMC2TYPE5.1 associated component *(AFR) of histone deacetylase... 0.04 OrthoFinder output from all 47 species
Cba_g50138 No alias associated component *(AFR) of histone deacetylase... 0.06 OrthoFinder output from all 47 species
Ceric.18G085500.1 Ceric.18G085500 associated component *(AFR) of histone deacetylase... 0.05 OrthoFinder output from all 47 species
Ceric.28G016000.1 Ceric.28G016000 associated component *(AFR) of histone deacetylase... 0.04 OrthoFinder output from all 47 species
Ceric.29G039900.1 Ceric.29G039900 associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Ehy_g06059 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
GSVIVT01019028001 No alias Chromatin organisation.histone modifications.histone... 0.03 OrthoFinder output from all 47 species
Len_g14311 No alias associated component *(AFR) of histone deacetylase... 0.05 OrthoFinder output from all 47 species
Len_g16678 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Lfl_g18360 No alias associated component *(AFR) of histone deacetylase... 0.07 OrthoFinder output from all 47 species
Mp7g07500.1 No alias associated component SAP30 of histone deacetylase machineries 0.02 OrthoFinder output from all 47 species
Msp_g01397 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Ore_g41852 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Pir_g00552 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Ppi_g30334 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0130.g022076 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Sam_g20047 No alias associated component *(AFR) of histone deacetylase... 0.05 OrthoFinder output from all 47 species
Sam_g30194 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Solyc04g079930.3.1 Solyc04g079930 associated component SAP30 of histone deacetylase machineries 0.03 OrthoFinder output from all 47 species
Tin_g10450 No alias associated component *(AFR) of histone deacetylase... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR025718 SAP30_Sin3-bd 94 147
No external refs found!