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  5. Als_g24103

Als_g24103


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g24103

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00240190 evm_27.TU.AmTr_v1... Cell cycle.organelle machineries.DNA... 0.02 OrthoFinder output from all 47 species
AT1G18485 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G16860 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g004372 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g057717 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17869 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g03943 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g42240 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16691 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g30728 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene48128.t1 Aspi01Gene48128 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0010.g012416 No alias not classified & original description: CDS=1-1722 0.03 OrthoFinder output from all 47 species
Azfi_s0028.g023921 No alias not classified & original description: CDS=1-2157 0.02 OrthoFinder output from all 47 species
Azfi_s0069.g036568 No alias not classified & original description: CDS=1-2256 0.03 OrthoFinder output from all 47 species
Azfi_s0095.g043642 No alias not classified & original description: CDS=144-2255 0.03 OrthoFinder output from all 47 species
Azfi_s0164.g054282 No alias not classified & original description: CDS=1-4443 0.03 OrthoFinder output from all 47 species
Cba_g07721 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07786 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g34546 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67898 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g77536 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G024400.1 Ceric.07G024400 not classified & original description: pacid=50626298... 0.03 OrthoFinder output from all 47 species
Dcu_g16922 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g32689 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g36056 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g36064 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g45933 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g49796 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13146 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g24510 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g49830.1 LOC_Os02g49830 Pentatricopeptide repeat-containing protein At3g22690... 0.01 OrthoFinder output from all 47 species
Len_g02898 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g03845 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18044 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g44142 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_408185g0010 No alias Pentatricopeptide repeat-containing protein At2g33760... 0.02 OrthoFinder output from all 47 species
MA_8893194g0010 MEF1 RNA editing factor (MEF1) 0.02 OrthoFinder output from all 47 species
Msp_g02463 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g04492 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g06349 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15850 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28512 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g31269 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g31404 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g35189 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04955 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04968 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07538 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g28140 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g44509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02292 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15313 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g52997 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g63223 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011866 No alias not classified & original description: CDS=1-2421 0.03 OrthoFinder output from all 47 species
Sam_g06304 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27930 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39170 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo90563 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.02 OrthoFinder output from all 47 species
Spa_g21942 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g28927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55537 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07666 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e013713_P001 Zm00001e013713 Pentatricopeptide repeat-containing protein At4g20770... 0.02 OrthoFinder output from all 47 species
Zm00001e015695_P001 Zm00001e015695 Pentatricopeptide repeat-containing protein At4g16835,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
InterPro domains Description Start Stop
IPR046848 E_motif 759 811
IPR002885 Pentatricopeptide_repeat 539 586
IPR002885 Pentatricopeptide_repeat 439 478
IPR002885 Pentatricopeptide_repeat 235 282
IPR002885 Pentatricopeptide_repeat 640 686
IPR002885 Pentatricopeptide_repeat 337 383
IPR002885 Pentatricopeptide_repeat 412 432
IPR002885 Pentatricopeptide_repeat 714 737
IPR002885 Pentatricopeptide_repeat 137 167
No external refs found!