Aliases : CRR22
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G18485 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT1G68930 | No alias | pentatricopeptide (PPR) repeat-containing protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G09040 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT3G26782 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT3G49740 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g033617 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g034915 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g035683 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g075582 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g096157 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g09730 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g23916 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g36524 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05094 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g39237 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g54961 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g60846 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g07366 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g27006 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g27232 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g27260 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g27882 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g28205 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g28645 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g30453 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g32957 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g16183 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g16691 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g18405 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g20195 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g35556 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g43404 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene06316.t1 | Aspi01Gene06316 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene33080.t1 | Aspi01Gene33080 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0028.g023921 | No alias | not classified & original description: CDS=1-2157 | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0059.g034645 | No alias | not classified & original description: CDS=1-2358 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0471.g072911 | No alias | not classified & original description: CDS=1-2451 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0544.g076391 | No alias | not classified & original description: CDS=1-906 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s1396.g102567 | No alias | not classified & original description: CDS=1-1371 | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s1775.g106729 | No alias | not classified & original description: CDS=1-2331 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g35120 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g35189 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g45942 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g67809 | OTP84 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.07G024400.1 | Ceric.07G024400 | not classified & original description: pacid=50626298... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.10G014900.1 | Ceric.10G014900 | not classified & original description: pacid=50613343... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.13G050400.1 | Ceric.13G050400 | not classified & original description: pacid=50636404... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00021035.24 | No alias | Pentatricopeptide repeat-containing protein At1g63080,... | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g21950 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g27114 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g28151 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g05756 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g07680 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08312 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g08313 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08760 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g12504 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g14626 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g15280 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g17110 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g36025 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g38580 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g38639 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g45110 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g50116 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g03842 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ehy_g19160 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g24017 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g31027 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01015466001 | LPA66 | Pentatricopeptide repeat-containing protein At5g48910... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01029382001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01037258001 | No alias | Pentatricopeptide repeat-containing protein At5g27110... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_00776 | No alias | Pentatricopeptide repeat-containing protein At5g50390,... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_21443 | OTP86 | Pentatricopeptide repeat-containing protein At3g63370,... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g18810.1 | LOC_Os02g18810 | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g38580.1 | EMB2261, LOC_Os03g38580 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os07g39090.1 | LOC_Os07g39090 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g24370 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g54974 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g56629 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g06745 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g14705 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g15171 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g24046 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_10434740g0010 | OSB1 | ssDNA-binding protein (OSB) | 0.02 | OrthoFinder output from all 47 species | |
| MA_27726g0010 | VAC1, ECB2, ATECB2 | RNA editing factor (ECB2/VAC1) | 0.03 | OrthoFinder output from all 47 species | |
| MA_42343g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.02 | OrthoFinder output from all 47 species | |
| MA_8893194g0010 | MEF1 | RNA editing factor (MEF1) | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g13610 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g15606 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g17747 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g34481 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g37727 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g45898 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g46085 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g47992 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g04955 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g04968 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g05482 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g07538 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g23751 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g28140 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g44509 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g44738 | VAC1, ECB2, ATECB2 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g15248 | OSB1 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g19382 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g03426 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g13553 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g13622 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g57980 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g61524 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g03470 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g25064 | CRR22 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g22095 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g40150 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g52997 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g53727 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g62708 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g63223 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0001.g000052 | EMB2758 | not classified & original description: CDS=1-1683 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0007.g003527 | EMB2758 | not classified & original description: CDS=1-1284 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0009.g004530 | VAC1, ECB2, ATECB2 | not classified & original description: CDS=1-2559 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0015.g006421 | No alias | not classified & original description: CDS=1-675 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0023.g008810 | No alias | not classified & original description: CDS=1-1683 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0075.g017370 | No alias | not classified & original description: CDS=72-2741 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0153.g023499 | No alias | not classified & original description: CDS=1-1593 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g06558 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g17279 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g27930 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g016540.2.1 | Solyc04g016540 | Pentatricopeptide repeat-containing protein At2g39620... | 0.01 | OrthoFinder output from all 47 species | |
| Solyc07g045510.4.1 | Solyc07g045510 | RNA editing factor (MEF7) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g007040.1.1 | Solyc09g007040 | Pentatricopeptide repeat-containing protein At3g53360,... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g00965 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g07522 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g14596 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g33733 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g44841 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g47727 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g55537 | DOT4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g13647 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g16806 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g16979 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g23279 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g29865 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e013713_P001 | Zm00001e013713 | Pentatricopeptide repeat-containing protein At4g20770... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e015440_P001 | CRR22, Zm00001e015440 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e015695_P001 | Zm00001e015695 | Pentatricopeptide repeat-containing protein At4g16835,... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006400 | tRNA modification | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| BP | GO:0031047 | RNA-mediated gene silencing | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0034227 | tRNA thio-modification | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 574 | 599 |
| IPR002885 | Pentatricopeptide_repeat | 374 | 396 |
| IPR002885 | Pentatricopeptide_repeat | 475 | 500 |
| IPR002885 | Pentatricopeptide_repeat | 273 | 297 |
| IPR046848 | E_motif | 617 | 679 |
| IPR002885 | Pentatricopeptide_repeat | 501 | 547 |
| IPR002885 | Pentatricopeptide_repeat | 299 | 345 |
| IPR002885 | Pentatricopeptide_repeat | 400 | 446 |
| IPR002885 | Pentatricopeptide_repeat | 97 | 143 |
| IPR002885 | Pentatricopeptide_repeat | 197 | 244 |
| No external refs found! |
