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  5. Als_g24232

Als_g24232 (GR-RBP4, GRP4)


Aliases : GR-RBP4, GRP4

Description : RNA editing factor *(ORRM3) & original description: none


Gene families : OG0000073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g24232

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00256900 GRP2, ATGRP2,... RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
AT4G13850 GRP2, ATGRP2, GR-RBP2 glycine-rich RNA-binding protein 2 0.03 OrthoFinder output from all 47 species
AT5G61030 GR-RBP3 glycine-rich RNA-binding protein 3 0.02 OrthoFinder output from all 47 species
Adi_g013366 ATRBP31, CP31,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g022574 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g034694 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g050015 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g078308 GR-RBP5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g081479 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g106770 CCR2, ATGRP7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g111293 CCR2, ATGRP7,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g06469 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00926 GR-RBP3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g01139 No alias RNA chaperone *(RZ1) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene50216.t1 GRP2, ATGRP2,... RNA editing factor *(ORRM3) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0468.g072856 GR-RBP4, GRP4 not classified & original description: CDS=1-582 0.03 OrthoFinder output from all 47 species
Cba_g01674 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g04821 No alias RNA chaperone *(RZ1) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g08805 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g14006 ATRZ-1A not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g44420 No alias RNA chaperone *(RZ1) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.09G066000.1 Ceric.09G066000 RNA chaperone *(RZ1) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.34G070600.1 GR-RBP3, Ceric.34G070600 not classified & original description: pacid=50624018... 0.03 OrthoFinder output from all 47 species
Ceric.35G013300.1 GR-RBP3, Ceric.35G013300 RNA editing factor *(ORRM3) & original description:... 0.03 OrthoFinder output from all 47 species
Cre01.g032300 PAB2, PABP2, ATPAB2 No description available 0.01 OrthoFinder output from all 47 species
Dac_g03970 GR-RBP5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03121 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16014 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g14516 GR-RBP4, GRP4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10436424g0010 ATRZ-1A RNA chaperone (RZ1|GR-RBP) 0.03 OrthoFinder output from all 47 species
MA_9594430g0010 No alias RNA chaperone (RZ1|GR-RBP) 0.01 OrthoFinder output from all 47 species
Mp6g08160.1 ATRZ-1A RNA chaperone (RZ1|GR-RBP) 0.03 OrthoFinder output from all 47 species
Msp_g12890 No alias RNA chaperone *(RZ1) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g29443 GR-RBP3 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g32203 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g00490 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10436 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19906 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23738 No alias RNA chaperone *(RZ1) & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g33178 GR-RBP3 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17461 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20372 GR-RBP3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26099 CCR2, ATGRP7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c4_6610V3.1 GRP2, ATGRP2,... glycine-rich RNA-binding protein 3 0.01 OrthoFinder output from all 47 species
Ppi_g25732 ATRZ-1A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000635 GR-RBP3 RNA editing factor *(ORRM3) & original description: CDS=202-855 0.03 OrthoFinder output from all 47 species
Sam_g14736 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25482 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38661 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo81392 GRP2, ATGRP2, GR-RBP2 RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
Solyc02g088790.3.1 GR-RBP3, Solyc02g088790 RNA editing factor (ORRM) 0.02 OrthoFinder output from all 47 species
Solyc10g084630.2.1 Solyc10g084630 Organelle RRM domain-containing protein 2, mitochondrial... 0.03 OrthoFinder output from all 47 species
Spa_g10567 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g12557 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g20439 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g22222 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g22687 CCR2, ATGRP7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30378 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10113 ATRZ-1A RNA chaperone *(RZ1) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g27808 GR-RBP4, GRP4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g30660 GR-RBP3 RNA ediTing factor *(ORRM3) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e028502_P003 Zm00001e028502 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e033010_P001 Zm00001e033010 RNA chaperone (RZ1|GR-RBP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004455 ketol-acid reductoisomerase activity IEP HCCA
BP GO:0006743 ubiquinone metabolic process IEP HCCA
BP GO:0006744 ubiquinone biosynthetic process IEP HCCA
BP GO:0009081 branched-chain amino acid metabolic process IEP HCCA
BP GO:0009082 branched-chain amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0042180 cellular ketone metabolic process IEP HCCA
BP GO:0042181 ketone biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:1901661 quinone metabolic process IEP HCCA
BP GO:1901663 quinone biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 109 179
No external refs found!