1. Home
  2. Species
  3. Psilotum nudum
  4. Sequence
  5. Pnu_g12793

Pnu_g12793


Description : not classified & original description: none


Gene families : OG0000171 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000171_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g12793
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00165980 evm_27.TU.AmTr_v1... Aldehyde oxidase GLOX OS=Vitis pseudoreticulata 0.03 OrthoFinder output from all 47 species
AMTR_s00225p00021580 evm_27.TU.AmTr_v1... Aldehyde oxidase GLOX1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Aev_g19138 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g39810 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g28282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06282 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g21323 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07290 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene01752.t1 Aspi01Gene01752 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01757.t1 Aspi01Gene01757 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19461.t1 Aspi01Gene19461 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene58771.t1 Aspi01Gene58771 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.33G020200.1 Ceric.33G020200 not classified & original description: pacid=50607549... 0.03 OrthoFinder output from all 47 species
Dcu_g01522 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g11245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26336 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g26816 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g32628 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50022 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_01456 No alias Aldehyde oxidase GLOX OS=Vitis pseudoreticulata... 0.02 OrthoFinder output from all 47 species
LOC_Os05g48520.1 LOC_Os05g48520 Aldehyde oxidase GLOX1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g39058 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04041 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_10437233g0010 No alias Aldehyde oxidase GLOX OS=Vitis pseudoreticulata... 0.03 OrthoFinder output from all 47 species
MA_10437233g0020 No alias Aldehyde oxidase GLOX OS=Vitis pseudoreticulata... 0.03 OrthoFinder output from all 47 species
MA_10437233g0040 No alias Aldehyde oxidase GLOX OS=Vitis pseudoreticulata... 0.03 OrthoFinder output from all 47 species
Mp4g17900.1 No alias Aldehyde oxidase GLOX OS=Vitis pseudoreticulata... 0.02 OrthoFinder output from all 47 species
Mp5g13680.1 No alias Aldehyde oxidase GLOX OS=Vitis pseudoreticulata... 0.02 OrthoFinder output from all 47 species
Msp_g07584 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g37598 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42726 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c4_20550V3.1 Pp3c4_20550 glyoxal oxidase-related protein 0.02 OrthoFinder output from all 47 species
Ppi_g09120 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g28851 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR009880 Glyoxal_oxidase_N 49 289
IPR015202 GO-like_E_set 441 543
No external refs found!