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  5. Pnu_g12804

Pnu_g12804


Description : deubiquitinase *(OTU6-12) & original description: none


Gene families : OG0001215 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001215_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g12804

Target Alias Description ECC score Gene Family Method Actions
AT3G22260 No alias Cysteine proteinases superfamily protein 0.03 OrthoFinder output from all 47 species
Azfi_s0113.g045889 No alias deubiquitinase *(OTU6-12) & original description: CDS=223-1266 0.03 OrthoFinder output from all 47 species
Dac_g02633 No alias deubiquitinase *(OTU6-12) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14935 No alias deubiquitinase *(OTU6-12) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e040804_P001 Zm00001e040804 C85 Otubain cysteine protease 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR003323 OTU_dom 211 300
No external refs found!