Pnu_g12809 (KCS4)

Aliases : KCS4

Description : 3-ketoacyl-CoA synthase *(KCS) & original description: none

Gene families : OG0000066 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pnu_g12809
Cluster	HCCA: Cluster_65

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00129p00102500	KCS5, CER60,...	3-ketoacyl-CoA synthase 5 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
Aev_g01295	KCS11	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.05	OrthoFinder output from all 47 species
Aev_g03997	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g13029	KCS1	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g43723	KCS11	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g48853	KCS11	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g14124	KCS10, FDH	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g00689	HIC, KCS13	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g03971	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g19664	KCS9	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g20970	KCS10, FDH	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g21920	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g37603	KCS1	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g68102	KCS1	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.36G023900.1	KCS4, Ceric.36G023900	3-ketoacyl-CoA synthase *(KCS) & original description:...	0.03	OrthoFinder output from all 47 species
Dcu_g50625	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01027424001	KCS1	Lipid metabolism.fatty acid synthesis.fatty acid...	0.04	OrthoFinder output from all 47 species
Gb_23820	KCS11	3-ketoacyl-CoA synthase (KCS)	0.03	OrthoFinder output from all 47 species
LOC_Os02g11070.1	KCS11, LOC_Os02g11070	3-ketoacyl-CoA synthase (KCS)	0.02	OrthoFinder output from all 47 species
Len_g03268	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Len_g16390	KCS11	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
MA_10605g0020	G2, POP1, KCS6,...	3-ketoacyl-CoA synthase (KCS)	0.02	OrthoFinder output from all 47 species
Mp2g20240.1	KCS11	3-ketoacyl-CoA synthase (KCS)	0.04	OrthoFinder output from all 47 species
Ore_g07470	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g07725	KCS10, FDH	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g44995	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g21396	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.04	OrthoFinder output from all 47 species
Solyc02g085870.3.1	G2, POP1, KCS6,...	3-ketoacyl-CoA synthase (KCS)	0.04	OrthoFinder output from all 47 species
Solyc03g005320.3.1	KCS20, Solyc03g005320	3-ketoacyl-CoA synthase (KCS)	0.03	OrthoFinder output from all 47 species
Solyc06g053870.4.1	KCS20, Solyc06g053870	3-ketoacyl-CoA synthase (KCS)	0.02	OrthoFinder output from all 47 species
Tin_g10524	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006633	fatty acid biosynthetic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000255	allantoin metabolic process	IEP	HCCA
BP	GO:0000256	allantoin catabolic process	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	HCCA
MF	GO:0016842	amidine-lyase activity	IEP	HCCA
BP	GO:0043605	amide catabolic process	IEP	HCCA
MF	GO:0044183	protein folding chaperone	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0046700	heterocycle catabolic process	IEP	HCCA
MF	GO:0050385	ureidoglycolate lyase activity	IEP	HCCA
MF	GO:0140662	ATP-dependent protein folding chaperone	IEP	HCCA
BP	GO:1901361	organic cyclic compound catabolic process	IEP	HCCA
BP	GO:1901565	organonitrogen compound catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013747	ACP_syn_III_C	395	473
IPR013601	FAE1_typ3_polyketide_synth	90	376

External Links

No external refs found!

Pnu_g12809 (KCS4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation