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  5. Als_g25394

Als_g25394


Description : not classified & original description: none


Gene families : OG0000369 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000369_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g25394

Target Alias Description ECC score Gene Family Method Actions
AT4G27740 No alias Yippee family putative zinc-binding protein 0.02 OrthoFinder output from all 47 species
Als_g00270 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g02267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22052 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g35338 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g57291 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene12522.t1 Aspi01Gene12522 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene40242.t1 Aspi01Gene40242 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0004.g008495 No alias not classified & original description: CDS=481-840 0.02 OrthoFinder output from all 47 species
Ceric.1Z280500.1 Ceric.1Z280500 not classified & original description: pacid=50606326... 0.03 OrthoFinder output from all 47 species
Dac_g01107 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g22840 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g03778 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g10047 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp6g13690.1 No alias Protein yippee-like At4g27745 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g41549 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g28621 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g050510.3.1 Solyc05g050510 Protein yippee-like At4g27745 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Spa_g08454 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10077 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g33234 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e038810_P001 Zm00001e038810 Putative yippee-like protein Os10g0369500 OS=Oryza... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004910 Yippee/Mis18/Cereblon 16 111
No external refs found!