Als_g26288


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g26288
Cluster HCCA: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00191560 OTP82,... Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
AT5G03800 emb1899, EMB175, EMB166 Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g005379 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g080261 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g42949 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17191 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g23759 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39735 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g58397 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16810 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g22510 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33010 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g69297 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0117.g046573 No alias not classified & original description: CDS=1-1419 0.03 OrthoFinder output from all 47 species
Azfi_s0470.g072895 No alias not classified & original description: CDS=1-1518 0.03 OrthoFinder output from all 47 species
Cba_g19893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g24587 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35045 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35072 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g66831 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67841 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g24765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g32529 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g39601 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g11021 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16922 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17220 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g29816 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g45940 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g46123 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g16796 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g25985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_16062 OTP84 Pentatricopeptide repeat-containing protein DOT4,... 0.04 OrthoFinder output from all 47 species
Len_g23812 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g44140 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g00934 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02375 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14573 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g06015 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14972 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28761 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03782 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04960 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16442 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19044 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27707 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g21836 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g22406 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06170 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g12352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12412 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g14870 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63642 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11526 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53018 DOT4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53961 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g02929 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07050 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24781 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g43840 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04758 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05579 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05987 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06670 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11396 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13065 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17618 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17867 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g22903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22999 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g26892 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27411 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g30402 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g35609 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g43987 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44074 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44226 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 110 156
IPR002885 Pentatricopeptide_repeat 212 258
IPR002885 Pentatricopeptide_repeat 7 54
IPR002885 Pentatricopeptide_repeat 186 208
IPR002885 Pentatricopeptide_repeat 84 106
No external refs found!