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  5. Als_g26308

Als_g26308


Description : component *(ADA1) of SAGA transcription co-activator complex & original description: none


Gene families : OG0001506 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001506_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g26308

Target Alias Description ECC score Gene Family Method Actions
Ala_g02361 No alias component *(ADA1) of SAGA transcription co-activator... 0.06 OrthoFinder output from all 47 species
Als_g09351 No alias component *(ADA1) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Aspi01Gene34950.t1 Aspi01Gene34950 component *(ADA1) of SAGA transcription co-activator... 0.04 OrthoFinder output from all 47 species
Cba_g17679 No alias component *(ADA1) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Cba_g32594 No alias component *(ADA1) of SAGA transcription co-activator... 0.06 OrthoFinder output from all 47 species
Cba_g39163 No alias component *(ADA1) of SAGA transcription co-activator... 0.04 OrthoFinder output from all 47 species
Dac_g03362 No alias component *(ADA1) of SAGA transcription co-activator... 0.04 OrthoFinder output from all 47 species
Ehy_g19414 No alias component *(ADA1) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
GSVIVT01037861001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.04 OrthoFinder output from all 47 species
LOC_Os04g56300.1 LOC_Os04g56300 component ADA1 of SAGA transcription co-activator complex 0.02 OrthoFinder output from all 47 species
Len_g19584 No alias component *(ADA1) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Lfl_g02173 No alias component *(ADA1) of SAGA transcription co-activator... 0.04 OrthoFinder output from all 47 species
Lfl_g04097 No alias component *(ADA1) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Pir_g11294 No alias component *(ADA1) of SAGA transcription co-activator... 0.05 OrthoFinder output from all 47 species
Sam_g18095 No alias component *(ADA1) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Sam_g39040 No alias component *(ADA1) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Solyc03g117820.1.1 Solyc03g117820 component ADA1 of SAGA transcription co-activator complex 0.04 OrthoFinder output from all 47 species
Tin_g01184 No alias component *(ADA1) of SAGA transcription co-activator... 0.04 OrthoFinder output from all 47 species
Zm00001e041823_P001 Zm00001e041823 component ADA1 of SAGA transcription co-activator complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0070461 SAGA-type complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR024738 Hfi1/Tada1 39 363
No external refs found!