Als_g26681 (VAC1, ECB2, ATECB2)


Aliases : VAC1, ECB2, ATECB2

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g26681

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00110050 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
AT1G47580 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g004506 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005655 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g022043 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035622 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036757 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g043352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g061193 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g097113 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g103876 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g109057 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g111309 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16835 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g18876 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25733 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g30597 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g31192 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36178 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05719 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05758 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18066 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18237 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18804 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18980 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19304 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22698 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26572 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g29063 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g29342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g40084 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g61706 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g04184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g11891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03544 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03547 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04200 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04578 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g08755 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16003 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16119 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16691 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16847 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17269 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g17427 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19645 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20851 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21628 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23672 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23676 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23762 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g26688 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g27203 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g27463 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28154 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28321 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28399 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28530 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28533 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g29160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31176 LPA66 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67673 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g67677 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67890 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g68098 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68104 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g69569 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0035.g025669 No alias not classified & original description: CDS=1-1770 0.03 OrthoFinder output from all 47 species
Cba_g02717 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05269 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05331 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07366 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07719 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19296 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19473 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19570 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19896 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19911 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20185 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g20779 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34546 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34641 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67248 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g67388 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67729 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67910 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G039400.1 Ceric.03G039400 not classified & original description: pacid=50571919... 0.03 OrthoFinder output from all 47 species
Ceric.09G007000.1 Ceric.09G007000 not classified & original description: pacid=50586983... 0.03 OrthoFinder output from all 47 species
Ceric.14G006100.1 Ceric.14G006100 not classified & original description: pacid=50634395... 0.04 OrthoFinder output from all 47 species
Ceric.14G013000.1 Ceric.14G013000 not classified & original description: pacid=50634838... 0.03 OrthoFinder output from all 47 species
Ceric.18G077200.1 Ceric.18G077200 not classified & original description: pacid=50621761... 0.03 OrthoFinder output from all 47 species
Ceric.1Z062400.1 Ceric.1Z062400 not classified & original description: pacid=50637425... 0.06 OrthoFinder output from all 47 species
Ceric.23G038700.1 Ceric.23G038700 not classified & original description: pacid=50609782... 0.05 OrthoFinder output from all 47 species
Ceric.27G070000.1 Ceric.27G070000 not classified & original description: pacid=50605490... 0.04 OrthoFinder output from all 47 species
Ceric.28G001700.1 Ceric.28G001700 not classified & original description: pacid=50570577... 0.03 OrthoFinder output from all 47 species
Ceric.29G060200.1 Ceric.29G060200 not classified & original description: pacid=50624987... 0.04 OrthoFinder output from all 47 species
Ceric.34G063100.1 Ceric.34G063100 not classified & original description: pacid=50623551... 0.04 OrthoFinder output from all 47 species
Ceric.35G018800.1 Ceric.35G018800 not classified & original description: pacid=50580757... 0.04 OrthoFinder output from all 47 species
Ceric.36G059800.1 Ceric.36G059800 not classified & original description: pacid=50568853... 0.05 OrthoFinder output from all 47 species
Ceric.39G022100.1 Ceric.39G022100 not classified & original description: pacid=50582510... 0.03 OrthoFinder output from all 47 species
Dac_g05763 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22020 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07101 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08045 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08260 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08967 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08971 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26405 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g37168 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g38682 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02951 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16483 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28151 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28526 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g24017 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26370 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012461001 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
GSVIVT01029254001 OSB4 RNA biosynthesis.organelle machineries.RNA polymerase... 0.03 OrthoFinder output from all 47 species
Len_g01885 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g02415 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g05423 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05443 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19006 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g23141 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g25473 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g44803 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05723 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07754 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10855 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g31355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32907 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g03953 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g06015 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g14089 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g14901 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g17457 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g22779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g22834 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28761 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34215 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34481 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g37758 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g44897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45777 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g45898 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05439 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g11470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15839 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g19491 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20199 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04075 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08941 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12697 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g21836 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23525 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32012 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40943 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02847 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03328 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03395 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05441 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12215 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13491 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g14507 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g17821 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g18069 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g28575 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g41187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57724 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63850 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g04533 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07521 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12943 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16080 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29479 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30405 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g44900 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53728 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53962 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53979 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0048.g013529 No alias ssDNA-binding protein *(OSB) & original description: CDS=539-3667 0.03 OrthoFinder output from all 47 species
Sam_g02933 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g09699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g12632 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13791 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27765 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38450 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39248 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50908 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g01903 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g15749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22619 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g31188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08446 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26639 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 23 70
IPR002885 Pentatricopeptide_repeat 228 273
IPR002885 Pentatricopeptide_repeat 125 172
IPR002885 Pentatricopeptide_repeat 302 324
IPR002885 Pentatricopeptide_repeat 99 123
IPR002885 Pentatricopeptide_repeat 201 223
IPR002885 Pentatricopeptide_repeat 535 557
IPR002885 Pentatricopeptide_repeat 431 461
IPR002885 Pentatricopeptide_repeat 403 427
IPR002885 Pentatricopeptide_repeat 330 359
IPR002885 Pentatricopeptide_repeat 498 527
No external refs found!