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  5. Als_g27548

Als_g27548


Description : subfamily ABCG transporter & original description: none


Gene families : OG0000438 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000438_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g27548
Cluster HCCA: Cluster_184

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00258490 ABCG14,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
AMTR_s00057p00214480 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AMTR_s00061p00187570 ABCG26, WBC27,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
AT3G25620 No alias ABC-2 type transporter family protein 0.03 OrthoFinder output from all 47 species
Aop_g07219 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21658 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene10922.t1 Aspi01Gene10922 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22309.t1 Aspi01Gene22309 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene36520.t1 Aspi01Gene36520 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g17387 No alias subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g32789 No alias sporopollenin precursor exporter *(ABCG26) & original... 0.04 OrthoFinder output from all 47 species
Cba_g35182 No alias subfamily ABCG transporter & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.13G008600.1 Ceric.13G008600 subfamily ABCG transporter & original description:... 0.01 OrthoFinder output from all 47 species
Dcu_g10865 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g22600 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014402001 No alias Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01036869001 ABCG14 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Gb_00289 ABCG26, WBC27 sporopollenin precursor exporter. subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Mp3g19930.1 ABCG26, WBC27 ABC transporter G family member 26 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g14978 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g31647 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25470 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g29229 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g16739 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0111.g020718 No alias not classified & original description: CDS=536-1729 0.03 OrthoFinder output from all 47 species
Spa_g06146 No alias subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g18374 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26315 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g09850 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e037432_P001 ABCG26, WBC27,... sporopollenin precursor exporter. subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 389 597
IPR043926 ABCG_dom 256 315
IPR003439 ABC_transporter-like_ATP-bd 77 227
No external refs found!