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  5. Als_g28323

Als_g28323


Description : C2H2 subclass ZFP transcription factor & original description: none


Gene families : OG0000096 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000096_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g28323

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00138p00067840 ZFP7,... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
AMTR_s00150p00049910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
AT1G68360 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G09290 TAC1 telomerase activator1 0.02 OrthoFinder output from all 47 species
Adi_g032518 No alias C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Adi_g058302 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aev_g07088 No alias C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g06187 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g02144 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aop_g06314 ZFP5 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aop_g18341 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aop_g44076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene15614.t1 Aspi01Gene15614 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene39584.t1 ZFP3, Aspi01Gene39584 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene63795.t1 Aspi01Gene63795 C2H2 subclass ZFP transcription factor & original... 0.05 OrthoFinder output from all 47 species
Cba_g29694 No alias C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.29G037400.1 ZFP10, ATZFP10,... C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.39G025200.1 JAG, Ceric.39G025200 transcriptional regulator *(JAG/NUB) & original... 0.03 OrthoFinder output from all 47 species
Dac_g02189 No alias C2H2 subclass ZFP transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ehy_g04711 No alias C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
LOC_Os02g08510.1 ZFP1, ATZFP1,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Len_g13450 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Len_g37209 No alias C2H2 subclass ZFP transcription factor & original... 0.05 OrthoFinder output from all 47 species
Lfl_g24190 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Msp_g09287 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g16757 No alias C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g39947 JAG transcriptional regulator *(JAG/NUB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16861 ZFP10, ATZFP10 C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pnu_g13466 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pp3c5_6880V3.1 Pp3c5_6880 C2H2 and C2HC zinc fingers superfamily protein 0.01 OrthoFinder output from all 47 species
Ppi_g05059 ZFP1, ATZFP1 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g33201 ZFP5 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g08899 No alias C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Solyc01g107430.2.1 ZFP7, Solyc01g107430 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Solyc04g014540.3.1 ZFP4, Solyc04g014540 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Spa_g05498 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g20614 No alias C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Spa_g56704 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0010274 hydrotropism IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA

No InterPro domains available for this sequence

No external refs found!