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  5. Als_g28379

Als_g28379


Description : not classified & original description: none


Gene families : OG0001497 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001497_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g28379

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00234440 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT2G16940 No alias Splicing factor, CC1-like 0.02 OrthoFinder output from all 47 species
AT5G09880 No alias Splicing factor, CC1-like 0.03 OrthoFinder output from all 47 species
Aob_g32208 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g41657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g62066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07014.t2 Aspi01Gene07014 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g36170 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.27G027600.1 Ceric.27G027600 not classified & original description: pacid=50605291... 0.06 OrthoFinder output from all 47 species
Cre04.g213905 No alias No description available 0.05 OrthoFinder output from all 47 species
Dac_g08281 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g20118 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g47761 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g24624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01023998001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_11513 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_39308 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os03g05830.1 LOC_Os03g05830 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os10g30370.1 LOC_Os10g30370 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Len_g58331 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g02031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g34973 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g26171 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g11719 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g41477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g60972 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25040 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13992 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc11g005170.2.1 Solyc11g005170 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g10142 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19702 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g29001 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e004710_P005 Zm00001e004710 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e012773_P005 Zm00001e012773 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e038994_P002 Zm00001e038994 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006505 GPI anchor metabolic process IEP HCCA
BP GO:0006506 GPI anchor biosynthetic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR029123 RBM39_linker 385 499
IPR000504 RRM_dom 200 258
IPR000504 RRM_dom 294 365
No external refs found!