Als_g30790


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g30790

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00153950 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
AMTR_s00010p00262470 OTP85 Pentatricopeptide repeat-containing protein At2g02980,... 0.02 OrthoFinder output from all 47 species
AMTR_s00025p00244370 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g05340... 0.05 OrthoFinder output from all 47 species
AMTR_s00032p00219990 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
AMTR_s00065p00031420 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g33680... 0.02 OrthoFinder output from all 47 species
AMTR_s00068p00031610 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
AMTR_s00083p00015670 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
AT2G03380 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g057344 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g058970 RARE1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g18046 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25601 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g28133 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ala_g36539 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19013 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g27948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g17095 OTP84 not classified & original description: none 0.12 OrthoFinder output from all 47 species
Aob_g19927 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27295 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aob_g28639 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g37336 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g37946 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g40241 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g03415 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g04000 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g06622 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g14000 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g28710 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g31523 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g67878 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g70560 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0002.g001624 No alias not classified & original description: CDS=110-1882 0.09 OrthoFinder output from all 47 species
Azfi_s0005.g009353 No alias not classified & original description: CDS=1-2883 0.05 OrthoFinder output from all 47 species
Cba_g04666 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g04734 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g06200 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06940 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20802 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g22369 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g23772 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G008600.1 Ceric.03G008600 not classified & original description: pacid=50571724... 0.06 OrthoFinder output from all 47 species
Ceric.20G006900.1 Ceric.20G006900 not classified & original description: pacid=50565918... 0.06 OrthoFinder output from all 47 species
Dac_g18242 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g43238 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g07698 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g07713 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g08493 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g28005 CRR2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g37178 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g50102 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g15346 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g25985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28521 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g35700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02726 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16109 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20585 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g29669 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009974001 No alias Pentatricopeptide repeat-containing protein At3g26540... 0.03 OrthoFinder output from all 47 species
LOC_Os03g62400.1 LOC_Os03g62400 Pentatricopeptide repeat-containing protein At3g13880... 0.02 OrthoFinder output from all 47 species
LOC_Os07g39090.1 LOC_Os07g39090 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os11g01836.1 LOC_Os11g01836 Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
Len_g18307 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g18417 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g12903 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_210823g0010 EMB2261 Pentatricopeptide repeat-containing protein At4g37170... 0.04 OrthoFinder output from all 47 species
Msp_g03167 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g13272 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g15863 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Msp_g29202 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g31719 LOI1, MEF11 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g38614 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g46064 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g04968 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g39469 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g40116 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g04708 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63818 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04614 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06693 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g16492 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g18809 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g011031 No alias not classified & original description: CDS=1-2574 0.02 OrthoFinder output from all 47 species
Sam_g07051 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17711 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24543 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25159 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g27190 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29586 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g33616 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g43221 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo34426 No alias Pentatricopeptide repeat-containing protein At4g14820... 0.05 OrthoFinder output from all 47 species
Smo76916 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
Spa_g15480 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g20468 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22312 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g22684 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g32786 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g44833 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45656 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Spa_g50886 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55201 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g56737 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06419 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Tin_g10198 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g10578 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g21192 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29210 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Tin_g29863 EMB2261 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g30423 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44063 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e023800_P003 PDE247, CLB19,... RNA editing factor (CLB19) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 149 172
IPR002885 Pentatricopeptide_repeat 71 120
IPR002885 Pentatricopeptide_repeat 174 221
No external refs found!