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  5. Als_g30888

Als_g30888 (OTP84)


Aliases : OTP84

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g30888
Cluster HCCA: Cluster_215

Target Alias Description ECC score Gene Family Method Actions
AT3G49170 EMB2261 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g20047 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g29330 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g42368 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06739 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g06816 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12718 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g19013 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26666 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26868 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30426 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30627 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06042 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g36101 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16410 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g33585 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02464.t1 Aspi01Gene02464 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000793 No alias not classified & original description: CDS=1-2415 0.01 OrthoFinder output from all 47 species
Azfi_s0003.g008059 No alias not classified & original description: CDS=1-504 0.01 OrthoFinder output from all 47 species
Azfi_s0022.g016134 OTP84 not classified & original description: CDS=1-2358 0.01 OrthoFinder output from all 47 species
Azfi_s0028.g023878 No alias not classified & original description: CDS=1-2883 0.02 OrthoFinder output from all 47 species
Azfi_s0069.g036581 No alias not classified & original description: CDS=1-1653 0.01 OrthoFinder output from all 47 species
Cba_g04046 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04734 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07194 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g07342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07786 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20561 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20874 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g22313 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29648 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35091 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g58405 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67772 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g76220 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cre12.g483700 OSB4 Cell cycle.organelle machineries.DNA... 0.01 OrthoFinder output from all 47 species
Dac_g18423 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18763 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23468 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g36017 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g45907 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g47882 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g05771 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46795 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g25037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g72049.1 PTAC9, OSB2,... ssDNA-binding protein (OSB). TAC9 cofactor of... 0.02 OrthoFinder output from all 47 species
Len_g04264 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g04805 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g09420 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g17343 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18988 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g30844 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g33779 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g44834 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g50232 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g04514 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g07379 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g07729 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g12623 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g15459 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15850 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g19069 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g19110 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g22363 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g23127 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31349 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g31404 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34152 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g34455 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g35725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g38951 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g45473 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g46019 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g46093 DOT4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g07857 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g14898 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g44449 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g30620 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06451 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11120 REME1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g22095 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29583 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53972 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11848 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g21944 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g45773 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g08133 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12101 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g07619 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g24321 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e028330_P001 PTAC9, OSB2,... ssDNA-binding protein (OSB). TAC9 cofactor of... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0032954 regulation of cytokinetic process IEP HCCA
BP GO:0032955 regulation of division septum assembly IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051301 cell division IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:1901891 regulation of cell septum assembly IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 178 224
IPR002885 Pentatricopeptide_repeat 480 527
IPR002885 Pentatricopeptide_repeat 76 124
IPR002885 Pentatricopeptide_repeat 280 326
IPR002885 Pentatricopeptide_repeat 378 426
IPR002885 Pentatricopeptide_repeat 555 579
IPR002885 Pentatricopeptide_repeat 253 276
IPR046848 E_motif 598 660
No external refs found!