Pnu_g13399 (emb2726)

Aliases : emb2726

Description : translation elongation factor *(EF-Ts) & original description: none

Gene families : OG0003250 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003250_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pnu_g13399
Cluster	HCCA: Cluster_4

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00109p00129480	emb2726,...	Protein biosynthesis.organelle translation...	0.04	OrthoFinder output from all 47 species
AT4G29060	emb2726	elongation factor Ts family protein	0.03	OrthoFinder output from all 47 species
Adi_g053355	emb2726	translation elongation factor *(EF-Ts) & original...	0.03	OrthoFinder output from all 47 species
Adi_g118105	emb2726	translation elongation factor *(EF-Ts) & original...	0.02	OrthoFinder output from all 47 species
Ala_g13148	emb2726	translation elongation factor *(EF-Ts) & original...	0.03	OrthoFinder output from all 47 species
Ala_g30187	emb2726	translation elongation factor *(EF-Ts) & original...	0.02	OrthoFinder output from all 47 species
Aob_g08834	emb2726	translation elongation factor *(EF-Ts) & original...	0.03	OrthoFinder output from all 47 species
Aop_g04344	emb2726	translation elongation factor *(EF-Ts) & original...	0.03	OrthoFinder output from all 47 species
Aop_g25286	emb2726	translation elongation factor *(EF-Ts) & original...	0.03	OrthoFinder output from all 47 species
Cre12.g519180	emb2726	Protein biosynthesis.organelle translation...	0.01	OrthoFinder output from all 47 species
Dac_g05556	emb2726	translation elongation factor *(EF-Ts) & original...	0.03	OrthoFinder output from all 47 species
Dac_g16809	emb2726	translation elongation factor *(EF-Ts) & original...	0.04	OrthoFinder output from all 47 species
Dac_g16810	emb2726	translation elongation factor *(EF-Ts) & original...	0.03	OrthoFinder output from all 47 species
Ehy_g05564	emb2726	translation elongation factor *(EF-Ts) & original...	0.03	OrthoFinder output from all 47 species
Ehy_g26260	emb2726	translation elongation factor *(EF-Ts) & original...	0.04	OrthoFinder output from all 47 species
Gb_29672	emb2726	EF-Ts translation elongation factor	0.04	OrthoFinder output from all 47 species
LOC_Os12g35630.1	emb2726, LOC_Os12g35630	EF-Ts translation elongation factor	0.03	OrthoFinder output from all 47 species
Len_g59815	emb2726	translation elongation factor *(EF-Ts) & original...	0.04	OrthoFinder output from all 47 species
MA_10436165g0010	emb2726	EF-Ts translation elongation factor	0.02	OrthoFinder output from all 47 species
Mp2g23510.1	emb2726	EF-Ts translation elongation factor	0.03	OrthoFinder output from all 47 species
Msp_g12193	emb2726	translation elongation factor *(EF-Ts) & original...	0.04	OrthoFinder output from all 47 species
Ore_g00299	emb2726	translation elongation factor *(EF-Ts) & original...	0.04	OrthoFinder output from all 47 species
Ore_g08953	emb2726	translation elongation factor *(EF-Ts) & original...	0.03	OrthoFinder output from all 47 species
Pir_g42601	emb2726	translation elongation factor *(EF-Ts) & original...	0.03	OrthoFinder output from all 47 species
Ppi_g11585	emb2726	translation elongation factor *(EF-Ts) & original...	0.03	OrthoFinder output from all 47 species
Smo60716	emb2726	Protein biosynthesis.organelle translation...	0.03	OrthoFinder output from all 47 species
Solyc07g018360.3.1	emb2726, Solyc07g018360	EF-Ts translation elongation factor	0.02	OrthoFinder output from all 47 species
Spa_g21728	emb2726	translation elongation factor *(EF-Ts) & original...	0.02	OrthoFinder output from all 47 species
Tin_g03798	emb2726	translation elongation factor *(EF-Ts) & original...	0.03	OrthoFinder output from all 47 species
Zm00001e010912_P001	emb2726, Zm00001e010912	EF-Ts translation elongation factor	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003746	translation elongation factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006414	translational elongation	IEA	Interproscan
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003690	double-stranded DNA binding	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0004601	peroxidase activity	IEP	HCCA
MF	GO:0004602	glutathione peroxidase activity	IEP	HCCA
MF	GO:0005543	phospholipid binding	IEP	HCCA
MF	GO:0005544	calcium-dependent phospholipid binding	IEP	HCCA
BP	GO:0006605	protein targeting	IEP	HCCA
BP	GO:0006612	protein targeting to membrane	IEP	HCCA
BP	GO:0006613	cotranslational protein targeting to membrane	IEP	HCCA
BP	GO:0006614	SRP-dependent cotranslational protein targeting to membrane	IEP	HCCA
BP	GO:0006950	response to stress	IEP	HCCA
BP	GO:0006979	response to oxidative stress	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
MF	GO:0016209	antioxidant activity	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
BP	GO:0033365	protein localization to organelle	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
BP	GO:0045047	protein targeting to ER	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
BP	GO:0050896	response to stimulus	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0051668	localization within membrane	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0070972	protein localization to endoplasmic reticulum	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
BP	GO:0072594	establishment of protein localization to organelle	IEP	HCCA
BP	GO:0072599	establishment of protein localization to endoplasmic reticulum	IEP	HCCA
BP	GO:0072657	protein localization to membrane	IEP	HCCA
BP	GO:0090150	establishment of protein localization to membrane	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR014039	Transl_elong_EFTs/EF1B_dimer	203	345

External Links

No external refs found!

Pnu_g13399 (emb2726)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation