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  5. Pnu_g13495

Pnu_g13495


Description : not classified & original description: none


Gene families : OG0000662 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000662_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g13495
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00131920 evm_27.TU.AmTr_v1... Clavaminate synthase-like protein At3g21360... 0.02 OrthoFinder output from all 47 species
Adi_g048053 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g01554 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g42726 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene47928.t1 Aspi01Gene47928 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g10758 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05565 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01016978001 No alias Clavaminate synthase-like protein At3g21360... 0.02 OrthoFinder output from all 47 species
Gb_16261 No alias Clavaminate synthase-like protein At3g21360... 0.02 OrthoFinder output from all 47 species
Gb_34217 No alias Clavaminate synthase-like protein At3g21360... 0.03 OrthoFinder output from all 47 species
Lfl_g26674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10427711g0010 No alias Clavaminate synthase-like protein At3g21360... 0.02 OrthoFinder output from all 47 species
MA_10431045g0030 No alias Clavaminate synthase-like protein At3g21360... 0.03 OrthoFinder output from all 47 species
Mp3g23080.1 No alias Clavaminate synthase-like protein At3g21360... 0.02 OrthoFinder output from all 47 species
Msp_g07199 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09527 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25382 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo439273 No alias Clavaminate synthase-like protein At3g21360... 0.02 OrthoFinder output from all 47 species
Zm00001e016597_P001 Zm00001e016597 Clavaminate synthase-like protein At3g21360... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007031 peroxisome organization IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
CC GO:0042579 microbody IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003819 TauD/TfdA-like 65 342
No external refs found!