Als_g32255


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g32255

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00087430 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g27610... 0.01 OrthoFinder output from all 47 species
AMTR_s00065p00031420 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g33680... 0.03 OrthoFinder output from all 47 species
AT1G15510 VAC1, ECB2, ATECB2 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g035943 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058970 RARE1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g085223 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g087163 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g109057 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g29330 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g33897 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g11078 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g12452 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g23936 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25745 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g26286 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g33318 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g37274 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g37976 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g38819 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07134 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26868 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02865 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g03404 MEF22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04254 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16323 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g17427 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g20139 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g23475 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g23933 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g39230 OTP84 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g65854 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67876 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0004.g008511 No alias not classified & original description: CDS=1-792 0.01 OrthoFinder output from all 47 species
Azfi_s0094.g043474 OTP84 not classified & original description: CDS=1-2043 0.03 OrthoFinder output from all 47 species
Azfi_s0190.g056908 No alias not classified & original description: CDS=47-3490 0.03 OrthoFinder output from all 47 species
Cba_g05966 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13797 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29871 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g34897 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35110 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67245 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.18G069700.1 CRR2, Ceric.18G069700 not classified & original description: pacid=50622363... 0.02 OrthoFinder output from all 47 species
Dac_g36039 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g45763 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g21496 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g40877 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g45797 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g47891 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g49048 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g49213 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g05389 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16907 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22602 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28705 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g31028 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g49997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g51266 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017996001 No alias Pentatricopeptide repeat-containing protein At4g14820... 0.03 OrthoFinder output from all 47 species
GSVIVT01023971001 No alias Pentatricopeptide repeat-containing protein At4g35130,... 0.02 OrthoFinder output from all 47 species
LOC_Os05g12130.1 EMB2261, LOC_Os05g12130 RNA editing factor (ECD1) 0.02 OrthoFinder output from all 47 species
LOC_Os05g49920.1 VAC1, ECB2,... RNA editing factor (ECB2/VAC1) 0.02 OrthoFinder output from all 47 species
LOC_Os05g50950.1 LOC_Os05g50950 Pentatricopeptide repeat-containing protein At4g01030,... 0.02 OrthoFinder output from all 47 species
LOC_Os08g42610.1 OTP81, LOC_Os08g42610 Pentatricopeptide repeat-containing protein At2g29760,... 0.01 OrthoFinder output from all 47 species
LOC_Os10g39460.2 LOC_Os10g39460 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Len_g04237 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g09420 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18252 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g19023 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_135075g0020 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
MA_20622g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
MA_34492g0010 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
MA_8319g0010 CRR2 Pentatricopeptide repeat-containing protein At3g24000,... 0.01 OrthoFinder output from all 47 species
MA_86628g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Msp_g04889 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g05274 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g05803 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g07709 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g16238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g18814 VAC1, ECB2, ATECB2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g22916 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g26081 MEF9 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g27922 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g28092 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g28331 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28799 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g33801 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g34152 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g38951 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g45472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48763 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07857 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g12572 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g16471 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g17180 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19527 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g27840 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g34799 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g38647 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g41047 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g41721 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g01899 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12962 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g66077 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g15003 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g15731 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05632 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07605 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11012 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29583 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29807 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g48708 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53021 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53366 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g55034 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g56225 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14540 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19460 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo125795 REME1 Pentatricopeptide repeat-containing protein At2g13600... 0.01 OrthoFinder output from all 47 species
Solyc03g119950.1.1 VAC1, ECB2,... RNA editing factor (ECB2/VAC1) 0.02 OrthoFinder output from all 47 species
Spa_g08133 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g09924 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g17205 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g18079 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g38826 REME1 not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 119 142
IPR002885 Pentatricopeptide_repeat 524 549
IPR002885 Pentatricopeptide_repeat 422 444
IPR002885 Pentatricopeptide_repeat 551 575
IPR002885 Pentatricopeptide_repeat 451 480
IPR002885 Pentatricopeptide_repeat 43 90
IPR002885 Pentatricopeptide_repeat 346 394
IPR002885 Pentatricopeptide_repeat 245 293
IPR002885 Pentatricopeptide_repeat 145 192
No external refs found!