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  5. Als_g33190

Als_g33190 (SPL8)


Aliases : SPL8

Description : SBP-type transcription factor & original description: none


Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g33190
Cluster HCCA: Cluster_236

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00150040 SPL13, SPL13A,... RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
AMTR_s00106p00142470 SPL11,... RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder output from all 47 species
AMTR_s00106p00142740 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00106p00144050 SPL8,... RNA biosynthesis.transcriptional activation.SBP... 0.04 OrthoFinder output from all 47 species
AT1G02065 SPL8 squamosa promoter binding protein-like 8 0.02 OrthoFinder output from all 47 species
Adi_g022585 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g026383 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g029308 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g054239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058412 SPL8 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g077071 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g112854 SPL10 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g01541 SPL7, ATSPL7 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g46381 SPL3 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g10879 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g17306 SPL3 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20298.t1 SPL8, Aspi01Gene20298 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s1820.g107212 No alias not classified & original description: CDS=1-336 0.03 OrthoFinder output from all 47 species
Cba_g36590 SPL7, ATSPL7 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.11G073300.1 SPL8, Ceric.11G073300 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.39G052200.1 SPL8, Ceric.39G052200 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Cre02.g112750 No alias RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder output from all 47 species
Cre09.g390023 SPL1 RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
Dcu_g03001 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g48516 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21516 SPL7, ATSPL7 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03958 SPL7, ATSPL7 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Len_g40710 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429891g0010 SPL2 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
MA_15381g0010 SPL10 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
MA_22749g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g10030.1 SPL2 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Nbi_g26273 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0171.g024379 SPL8 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0267.g026971 SPL8 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Tin_g09011 SPL3 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g10032 SPL3 SBP-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e034537_P001 AtSPL9, SPL9,... transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Zm00001e034628_P001 SPL13, SPL13A,... transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Zm00001e035060_P002 SPL4, Zm00001e035060 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Zm00001e041526_P001 SPL3, Zm00001e041526 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004333 SBP_dom 127 200
IPR004333 SBP_dom 351 424
No external refs found!