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  5. Pnu_g13689

Pnu_g13689 (ATOFP6, OFP6)


Aliases : ATOFP6, OFP6

Description : transcriptional co-regulator *(OFP) & original description: none


Gene families : OG0000209 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000209_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g13689
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00027p00241200 ATOFP5, OFP5,... RNA biosynthesis.transcriptional activation.OFP... 0.03 OrthoFinder output from all 47 species
Adi_g075269 ATOFP6, OFP6 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g34589 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g20318 No alias transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32425.t1 Aspi01Gene32425 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.26G022300.1 OFP4, ATOFP4,... transcriptional co-regulator *(OFP) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g03097 OFP4, ATOFP4 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06311 OFP8, ATOFP8 transcriptional co-regulator *(OFP) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g12032 ATOFP5, OFP5 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g28603 OFP4, ATOFP4 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g34037 ATOFP6, OFP6 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g36963 ATOFP6, OFP6 transcriptional co-regulator *(OFP) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g10167 ATOFP5, OFP5 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24834 No alias transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18359 No alias transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os05g39950.1 OFP4, ATOFP4,... transcription factor (OFP) 0.03 OrthoFinder output from all 47 species
LOC_Os10g38880.1 OFP8, ATOFP8,... transcription factor (OFP) 0.02 OrthoFinder output from all 47 species
LOC_Os11g05780.1 LOC_Os11g05780 transcription factor (OFP) 0.02 OrthoFinder output from all 47 species
LOC_Os12g06160.1 LOC_Os12g06160 transcription factor (OFP) 0.03 OrthoFinder output from all 47 species
MA_2468787g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_31710g0010 ATOFP3, OFP3 transcription factor (OFP) 0.03 OrthoFinder output from all 47 species
Nbi_g42815 ATOFP6, OFP6 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g45041 ATOFP6, OFP6 transcriptional co-regulator *(OFP) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g05254 ATOFP5, OFP5 transcriptional co-regulator *(OFP) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g62494 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g072030.1.1 ATOFP5, OFP5,... transcription factor (OFP) 0.02 OrthoFinder output from all 47 species
Solyc06g082460.1.1 OFP4, ATOFP4,... transcription factor (OFP) 0.02 OrthoFinder output from all 47 species
Solyc09g082080.1.1 OFP12, ATOFP12,... transcription factor (OFP) 0.02 OrthoFinder output from all 47 species
Solyc11g006670.1.1 ATOFP13, OFP13,... transcription factor (OFP) 0.02 OrthoFinder output from all 47 species
Spa_g30376 No alias transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31037 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g38119 No alias transcriptional co-regulator *(OFP) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e020414_P001 ATOFP7, OFP7,... transcription factor (OFP) 0.03 OrthoFinder output from all 47 species
Zm00001e028843_P001 OFP4, ATOFP4,... transcription factor (OFP) 0.02 OrthoFinder output from all 47 species
Zm00001e033910_P001 OFP14, ATOFP14,... transcription factor (OFP) 0.02 OrthoFinder output from all 47 species
Zm00001e041975_P001 ATOFP13, OFP13,... transcription factor (OFP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
CC GO:0048046 apoplast IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
InterPro domains Description Start Stop
IPR006458 Ovate_C 555 611
No external refs found!