Aliases : EXPA16, ATHEXP ALPHA 1.7, ATEXP16, EXP16, ATEXPA16
Description : alpha-class expansin & original description: none
Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Als_g37460 | |
| Cluster | HCCA: Cluster_110 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00270650 | ATEXPA11, ATHEXP... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.03 | OrthoFinder output from all 47 species | |
| AT3G45960 | ATEXLA3, EXPL3,... | expansin-like A3 | 0.02 | OrthoFinder output from all 47 species | |
| Als_g47332 | EXPB3, ATEXPB3,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g52111 | EXPA16, ATHEXP... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g52112 | EXP9, EXPA9,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g17770 | ATEXPA10,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g33159 | ATEXPA4, ATEXP4,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g25653 | EXPA8, ATHEXP... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g26026 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g41089 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g43799 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g50026 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01008762001 | ATEXPA11, ATHEXP... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01028215001 | ATHEXP ALPHA... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.03 | OrthoFinder output from all 47 species | |
| Gb_01958 | EXPA8, ATHEXP... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g60770.1 | LOC_Os01g60770 | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g44108.1 | ATHEXP BETA 1.4,... | Expansin-B11 OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g22797 | ATEXPA10,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g36480 | ATEXPA1, EXP1,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g40078 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_201510g0010 | ATEXPL2, EXPL2,... | alpha-like-class expansin. beta-like-class expansin | 0.02 | OrthoFinder output from all 47 species | |
| MA_41212g0010 | ATHEXP BETA 3.1,... | beta-like-class expansin | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g30638 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g34219 | ATEXPA3, EXP3,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0014.g006211 | ATEXPA4, ATEXP4,... | alpha-class expansin & original description: CDS=682-1482 | 0.04 | OrthoFinder output from all 47 species | |
| Smo90935 | EXPA16, ATHEXP... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g081210.3.1 | ATEXP13,... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g25448 | ATEXPA3, EXP3,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e037885_P001 | ATHEXP BETA 1.4,... | Expansin-B6 OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000271 | polysaccharide biosynthetic process | IEP | HCCA |
| CC | GO:0000276 | mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) | IEP | HCCA |
| MF | GO:0003724 | RNA helicase activity | IEP | HCCA |
| MF | GO:0003779 | actin binding | IEP | HCCA |
| MF | GO:0004373 | glycogen (starch) synthase activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| CC | GO:0005783 | endoplasmic reticulum | IEP | HCCA |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
| BP | GO:0005977 | glycogen metabolic process | IEP | HCCA |
| BP | GO:0005978 | glycogen biosynthetic process | IEP | HCCA |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | HCCA |
| BP | GO:0006112 | energy reserve metabolic process | IEP | HCCA |
| BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0006605 | protein targeting | IEP | HCCA |
| BP | GO:0006754 | ATP biosynthetic process | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| MF | GO:0008186 | ATP-dependent activity, acting on RNA | IEP | HCCA |
| BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009250 | glucan biosynthetic process | IEP | HCCA |
| BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| BP | GO:0015980 | energy derivation by oxidation of organic compounds | IEP | HCCA |
| BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | HCCA |
| BP | GO:0033365 | protein localization to organelle | IEP | HCCA |
| BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | HCCA |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
| MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | HCCA |
| BP | GO:0044042 | glucan metabolic process | IEP | HCCA |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | HCCA |
| BP | GO:0045047 | protein targeting to ER | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| CC | GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) | IEP | HCCA |
| BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
| MF | GO:0046527 | glucosyltransferase activity | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | HCCA |
| BP | GO:0071702 | organic substance transport | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | HCCA |
| BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | HCCA |
| CC | GO:0098798 | mitochondrial protein-containing complex | IEP | HCCA |
| CC | GO:0098800 | inner mitochondrial membrane protein complex | IEP | HCCA |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
| No external refs found! |
