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  5. Als_g38183

Als_g38183 (ATWBC11, ABCG11, DSO,...)


Aliases : ATWBC11, ABCG11, DSO, COF1, WBC11

Description : subfamily ABCG transporter & original description: none


Gene families : OG0000139 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000139_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g38183
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AT1G51460 No alias ABC-2 type transporter family protein 0.02 OrthoFinder output from all 47 species
Aop_g37536 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene65902.t1 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05431 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Len_g30376 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Smo167920 ATWBC11, ABCG11,... Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Spa_g07523 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12541 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 471 681
IPR003439 ABC_transporter-like_ATP-bd 169 320
IPR043926 ABCG_dom 349 409
No external refs found!