Als_g38696


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g38696

Target Alias Description ECC score Gene Family Method Actions
AT1G31430 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g003282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004274 LPA66 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g004372 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g004502 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g015988 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g033331 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g053631 MEF19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058239 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g067305 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g081792 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g089353 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g095207 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099021 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099248 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21218 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37527 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06600 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13621 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21668 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33506 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07067 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07162 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14142 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18790 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g28097 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30821 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g14037 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27006 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g27904 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28205 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28235 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28645 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g30453 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g40212 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03817 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09002 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19645 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g29262 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68030 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene24968.t1 Aspi01Gene24968 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56965.t1 Aspi01Gene56965 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63595.t1 EMB2261, Aspi01Gene63595 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71734.t1 Aspi01Gene71734 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g009022 No alias not classified & original description: CDS=1-2334 0.02 OrthoFinder output from all 47 species
Azfi_s0028.g023921 No alias not classified & original description: CDS=1-2157 0.02 OrthoFinder output from all 47 species
Azfi_s0042.g026834 No alias not classified & original description: CDS=1-1929 0.03 OrthoFinder output from all 47 species
Azfi_s0045.g029773 No alias not classified & original description: CDS=1-489 0.04 OrthoFinder output from all 47 species
Azfi_s0061.g034904 No alias not classified & original description: CDS=1-1944 0.04 OrthoFinder output from all 47 species
Azfi_s0081.g038564 EMB2758 not classified & original description: CDS=1-2661 0.02 OrthoFinder output from all 47 species
Azfi_s0098.g043939 EMB2758 not classified & original description: CDS=1-1746 0.03 OrthoFinder output from all 47 species
Azfi_s0245.g060017 No alias not classified & original description: CDS=1-2076 0.02 OrthoFinder output from all 47 species
Cba_g03378 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g03394 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05960 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06580 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07614 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g10344 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11842 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g12399 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15277 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g18562 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19568 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19888 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20164 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20828 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20886 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g22543 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29529 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34428 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34645 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g45942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g56780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G076400.1 Ceric.13G076400 not classified & original description: pacid=50635248... 0.03 OrthoFinder output from all 47 species
Ceric.21G046800.1 Ceric.21G046800 not classified & original description: pacid=50603820... 0.03 OrthoFinder output from all 47 species
Ceric.26G013500.1 Ceric.26G013500 not classified & original description: pacid=50600195... 0.03 OrthoFinder output from all 47 species
Ceric.31G002400.1 Ceric.31G002400 not classified & original description: pacid=50574432... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021035.24 No alias Pentatricopeptide repeat-containing protein At1g63080,... 0.01 OrthoFinder output from all 47 species
Dac_g08183 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g27446 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35222 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g35674 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g43653 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08293 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08935 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17097 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g32689 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g36076 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g43123 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g45940 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47943 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g07665 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26885 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g35433 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g38218 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g51368 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g00984 OSB3 cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.02 OrthoFinder output from all 47 species
Ehy_g06075 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12128 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16109 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19916 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24510 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26917 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009574001 OSB1 Cell cycle.organelle machineries.DNA... 0.03 OrthoFinder output from all 47 species
GSVIVT01010031001 No alias RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
Gb_16062 OTP84 Pentatricopeptide repeat-containing protein DOT4,... 0.04 OrthoFinder output from all 47 species
Gb_38938 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
LOC_Os03g38580.1 EMB2261, LOC_Os03g38580 Pentatricopeptide repeat-containing protein At3g24000,... 0.02 OrthoFinder output from all 47 species
LOC_Os07g39090.1 LOC_Os07g39090 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Len_g17973 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g21362 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g25719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26141 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g45824 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54973 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07691 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g19657 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24046 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38041 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39239 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_597g0020 DOT4 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
MA_77675g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
MA_794605g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Msp_g09602 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g28092 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g28794 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g46024 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16471 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g22167 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23755 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g28140 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19382 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33905 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12185 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12950 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13553 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g43620 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57347 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63861 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g02465 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15731 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03156 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07606 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16080 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g27062 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29479 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43466 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g44900 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g48074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57978 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59338 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g62370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27568 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27765 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29120 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g47343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48011 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51263 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo90563 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.02 OrthoFinder output from all 47 species
Solyc04g016540.2.1 Solyc04g016540 Pentatricopeptide repeat-containing protein At2g39620... 0.02 OrthoFinder output from all 47 species
Spa_g00965 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g07138 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39673 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g44841 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01122 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05928 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06551 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06622 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g16956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23279 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29865 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g34283 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g35298 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011923_P001 Zm00001e011923 Pentatricopeptide repeat-containing protein At4g21300... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008172 S-methyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 390 438
IPR002885 Pentatricopeptide_repeat 154 200
IPR002885 Pentatricopeptide_repeat 52 99
IPR002885 Pentatricopeptide_repeat 255 293
IPR002885 Pentatricopeptide_repeat 530 557
IPR002885 Pentatricopeptide_repeat 229 254
IPR002885 Pentatricopeptide_repeat 466 489
IPR002885 Pentatricopeptide_repeat 494 524
IPR046848 E_motif 612 671
IPR046849 Eplus_motif 676 700
No external refs found!