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  5. Als_g39000

Als_g39000


Description : component *(eS31) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g39000

Target Alias Description ECC score Gene Family Method Actions
Ala_g10801 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g31081 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g27421 RUB1, ATRUB1, NEDD8 RUB ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g50123 RUB1, ATRUB1, NEDD8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08346.t1 UBQ11, Aspi01Gene08346 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene08356.t1 UBQ11, Aspi01Gene08356 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.05G024400.1 UBQ14, Ceric.05G024400 UBQ ubiquitin-fold protein & original description:... 0.14 OrthoFinder output from all 47 species
Ceric.08G062700.1 UBQ11, Ceric.08G062700 UBQ ubiquitin-fold protein & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.21G057400.1 UBQ6, Ceric.21G057400 component *(eS31) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Ehy_g25908 UBQ5 component *(eS31) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
LOC_Os01g45420.1 RUB1, ATRUB1,... Ubiquitin-like protein-NEDD8-like protein RUB3 OS=Oryza... 0.01 OrthoFinder output from all 47 species
Len_g27536 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 47 species
Len_g41265 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g22645 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g23365 UBQ6 component *(eS31) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species
Lfl_g23519 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 47 species
MA_13101g0020 No alias component RPL40 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Smo111605 UBQ6 Protein biosynthesis.cytosolic ribosome.small subunit... 0.01 OrthoFinder output from all 47 species
Smo93613 RUB1, ATRUB1, NEDD8 Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Spa_g02055 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR002906 Ribosomal_S27a 102 147
IPR000626 Ubiquitin-like_dom 3 74
No external refs found!