1. Home
  2. Species
  3. Alsophila latebrosa
  4. Sequence
  5. Als_g39127

Als_g39127


Description : aminoacyl-tRNA binding factor *(eEF1A)) & original description: none


Gene families : OG0000296 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000296_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g39127

Target Alias Description ECC score Gene Family Method Actions
AT5G60390 No alias GTP binding Elongation factor Tu family protein 0.02 OrthoFinder output from all 47 species
Ala_g31488 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.01 OrthoFinder output from all 47 species
Als_g11645 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.01 OrthoFinder output from all 47 species
Aop_g09508 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene14289.t1 Aspi01Gene14289 aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene27887.t1 Aspi01Gene27887 aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.01 OrthoFinder output from all 47 species
Aspi01Gene56906.t1 Aspi01Gene56906 aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.02 OrthoFinder output from all 47 species
Ceric.06G056100.1 Ceric.06G056100 aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.01 OrthoFinder output from all 47 species
Ceric.09G081400.1 Ceric.09G081400 aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.02 OrthoFinder output from all 47 species
Ceric.31G073700.1 Ceric.31G073700 aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.02 OrthoFinder output from all 47 species
Dac_g20808 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g09531 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.02 OrthoFinder output from all 47 species
Dde_g04362 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.01 OrthoFinder output from all 47 species
GSVIVT01014488001 No alias Elongation factor 1-alpha OS=Manihot esculenta 0.01 OrthoFinder output from all 47 species
Len_g28220 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.01 OrthoFinder output from all 47 species
Len_g51156 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.02 OrthoFinder output from all 47 species
Len_g55835 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.01 OrthoFinder output from all 47 species
Lfl_g07312 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.01 OrthoFinder output from all 47 species
Lfl_g07746 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.01 OrthoFinder output from all 47 species
Lfl_g27478 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.01 OrthoFinder output from all 47 species
MA_59994g0010 No alias Elongation factor 1-alpha OS=Glycine max... 0.01 OrthoFinder output from all 47 species
Mp3g23400.1 No alias aminoacyl-tRNA binding factor (eEF1A) 0.01 OrthoFinder output from all 47 species
Msp_g07081 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.02 OrthoFinder output from all 47 species
Msp_g29578 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g38252 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g08139 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.02 OrthoFinder output from all 47 species
Pir_g11226 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.01 OrthoFinder output from all 47 species
Sam_g16999 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.02 OrthoFinder output from all 47 species
Sam_g28089 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g37732 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.01 OrthoFinder output from all 47 species
Smo169717 No alias Protein biosynthesis.translation elongation.eEF1A... 0.04 OrthoFinder output from all 47 species
Spa_g33042 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g46936 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.01 OrthoFinder output from all 47 species
Spa_g50271 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.02 OrthoFinder output from all 47 species
Spa_g50272 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.01 OrthoFinder output from all 47 species
Spa_g50273 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e026763_P003 Zm00001e026763 aminoacyl-tRNA binding factor (eEF1A) 0.03 OrthoFinder output from all 47 species
Zm00001e030598_P002 Zm00001e030598 aminoacyl-tRNA binding factor (eEF1A) 0.02 OrthoFinder output from all 47 species
Zm00001e031390_P004 Zm00001e031390 aminoacyl-tRNA binding factor (eEF1A) 0.03 OrthoFinder output from all 47 species
Zm00001e031391_P002 Zm00001e031391 aminoacyl-tRNA binding factor (eEF1A) 0.03 OrthoFinder output from all 47 species
Zm00001e035252_P001 Zm00001e035252 aminoacyl-tRNA binding factor (eEF1A) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR004161 EFTu-like_2 147 212
IPR000795 T_Tr_GTP-bd_dom 1 120
IPR004160 Transl_elong_EFTu/EF1A_C 220 328
No external refs found!