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  5. Als_g40043

Als_g40043 (RTNLB2, BTI2)


Aliases : RTNLB2, BTI2

Description : ER-tubule curvature-inducing protein *(Reticulon) & original description: none


Gene families : OG0000272 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000272_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g40043
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
Ala_g24680 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.08 OrthoFinder output from all 47 species
Ala_g25844 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene63604.t1 BTI1, RTNLB1,... ER-tubule curvature-inducing protein *(Reticulon) &... 0.05 OrthoFinder output from all 47 species
Ceric.19G012300.1 Ceric.19G012300 ER-tubule curvature-inducing protein *(Reticulon) &... 0.08 OrthoFinder output from all 47 species
Dcu_g36852 BTI1, RTNLB1 ER-tubule curvature-inducing protein *(Reticulon) &... 0.04 OrthoFinder output from all 47 species
Ehy_g03409 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Gb_33890 No alias ER-associated protein (Reticulon) 0.03 OrthoFinder output from all 47 species
LOC_Os01g49660.1 LOC_Os01g49660 ER-associated protein (Reticulon) 0.02 OrthoFinder output from all 47 species
Len_g56590 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.06 OrthoFinder output from all 47 species
MA_10432752g0010 No alias ER-associated protein (Reticulon) 0.03 OrthoFinder output from all 47 species
Msp_g38145 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.04 OrthoFinder output from all 47 species
Pnu_g00356 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Sam_g11395 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Sam_g37684 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.07 OrthoFinder output from all 47 species
Spa_g37965 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.05 OrthoFinder output from all 47 species
Tin_g14300 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Zm00001e014238_P002 RTNLB2, BTI2,... ER-associated protein (Reticulon) 0.02 OrthoFinder output from all 47 species
Zm00001e016413_P001 BTI1, RTNLB1,... ER-associated protein (Reticulon) 0.02 OrthoFinder output from all 47 species
Zm00001e019883_P002 BTI1, RTNLB1,... ER-associated protein (Reticulon) 0.02 OrthoFinder output from all 47 species
Zm00001e026095_P001 RTNLB2, BTI2,... ER-associated protein (Reticulon) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003388 Reticulon 95 250
No external refs found!