Als_g40083 (PIR1, MAP1, AUX1, WAV5)


Aliases : PIR1, MAP1, AUX1, WAV5

Description : auxin transporter *(AUX/LAX) & original description: none


Gene families : OG0000450 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000450_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g40083

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00205360 LAX3,... Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
Aob_g07362 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04961 PIR1, MAP1, AUX1, WAV5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G049100.1 Ceric.14G049100 not classified & original description: pacid=50633850... 0.03 OrthoFinder output from all 47 species
Dac_g15464 LAX1 auxin transporter *(AUX/LAX) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04772 LAX1 auxin transporter *(AUX/LAX) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os10g05690.1 LAX2, LOC_Os10g05690 auxin transporter (AUX/LAX) 0.03 OrthoFinder output from all 47 species
Nbi_g27241 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g00627 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25385 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25386 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31670 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25880 No alias auxin transporter *(AUX/LAX) & original description: none 0.03 OrthoFinder output from all 47 species
Smo78094 LAX1 Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
Smo78325 LAX3 Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
Solyc10g055260.2.1 LAX2, Solyc10g055260 auxin transporter (AUX/LAX) 0.02 OrthoFinder output from all 47 species
Tin_g45188 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e024497_P001 LAX3, Zm00001e024497 auxin transporter (AUX/LAX) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006952 defense response IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 2 298
No external refs found!