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  5. Als_g40202

Als_g40202 (ATH-A, CESA2, ATCESA2)


Aliases : ATH-A, CESA2, ATCESA2

Description : catalytic component *(CesA) of cellulose synthase complex & original description: none


Gene families : OG0000089 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000089_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g40202
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
Aob_g15979 ATCSLD3, KJK, CSLD3 mannan synthase *(CSLD) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0004.g008840 ATCSLD3, KJK, CSLD3 mannan synthase *(CSLD) & original description: CDS=44-3832 0.03 OrthoFinder output from all 47 species
GSVIVT01007038001 ATCSLE1, CSLE1 Cellulose synthase-like protein E1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01014703001 ATCSLE1, CSLE1 Cellulose synthase-like protein E1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01032096001 IXR1, CEV1,... Cell wall.cellulose.synthesis.cellulose synthase complex... 0.02 OrthoFinder output from all 47 species
GSVIVT01035830001 AtCESA1, RSW1, CESA1 Cell wall.cellulose.synthesis.cellulose synthase complex... 0.03 OrthoFinder output from all 47 species
Gb_39671 ATCSLD3, KJK, CSLD3 mannan synthase (CSLD) 0.02 OrthoFinder output from all 47 species
MA_10430696g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g05670.1 ATCSLD3, KJK, CSLD3 catalytic component CesA of cellulose synthase complex.... 0.02 OrthoFinder output from all 47 species
Msp_g15265 ATCSLD3, KJK, CSLD3 mannan synthase *(CSLD) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g22229 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Smo163575 IXR1, CEV1,... Cell wall.cellulose.synthesis.cellulose synthase complex... 0.02 OrthoFinder output from all 47 species
Solyc01g067520.3.1 ATCSLD4, CSLD4,... mannan synthase (CSLD) 0.03 OrthoFinder output from all 47 species
Solyc05g053560.4.1 CSLD1, ATCSLD1,... mannan synthase (CSLD) 0.02 OrthoFinder output from all 47 species
Spa_g05758 AtCESA1, RSW1, CESA1 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Spa_g09428 ATCSLD3, KJK, CSLD3 mannan synthase *(CSLD) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21970 IXR1, CEV1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39807 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Spa_g49131 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Spa_g56569 ATCSLD3, KJK, CSLD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0016760 cellulose synthase (UDP-forming) activity IEA Interproscan
BP GO:0030244 cellulose biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006820 monoatomic anion transport IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
MF GO:0051920 peroxiredoxin activity IEP HCCA
InterPro domains Description Start Stop
IPR005150 Cellulose_synth 368 971
IPR027934 CES_Znf_RING 27 103
No external refs found!