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  5. Als_g40722

Als_g40722 (AGD11)


Aliases : AGD11

Description : calcium sensor *(CML) & original description: none


Gene families : OG0000205 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000205_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g40722
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
Adi_g006558 CML42 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g008652 AGD11 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g017795 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g124154 UNE14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g05225 AGD11 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g21677 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g36968 UNE14 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g15132 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene04937.t1 AGD11, Aspi01Gene04937 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34969.t1 UNE14, Aspi01Gene34969 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0143.g051443 UNE14 calcium sensor *(CML) & original description: CDS=1-462 0.01 OrthoFinder output from all 47 species
Dac_g12031 CML42 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g41575 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11295 CML39, CML37 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19176 CML42 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24054 CML42 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g21380.2 CML42, LOC_Os03g21380 Probable calcium-binding protein CML27 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Len_g04938 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_27386g0010 UNE14 Probable calcium-binding protein CML27 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
MA_7799814g0010 CML41 Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g42557 AGD11 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g14760 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g05778 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15190 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc11g044920.1.1 AGD11, Solyc11g044920 Calmodulin-like protein 7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g11411 AGD11 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004089 carbonate dehydratase activity IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 61 90
IPR002048 EF_hand_dom 186 251
No external refs found!