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  5. Als_g41299

Als_g41299


Description : not classified & original description: none


Gene families : OG0000154 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000154_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g41299
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
AT1G19180 TIFY10A, JAZ1 jasmonate-zim-domain protein 1 0.02 OrthoFinder output from all 47 species
AT1G48500 JAZ4, TIFY6A jasmonate-zim-domain protein 4 0.03 OrthoFinder output from all 47 species
AT1G72450 TIFY11B, JAZ6 jasmonate-zim-domain protein 6 0.03 OrthoFinder output from all 47 species
Adi_g015978 JAZ12, TIFY3B TIFY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g47698 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g35232 PPD2, TIFY4B TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g35874 JAZ12, TIFY3B TIFY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene10904.t1 JAZ9, TIFY7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26300 JAZ9, TIFY7 TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01023256001 JAZ12, TIFY3B RNA biosynthesis.transcriptional activation.TIFY... 0.03 OrthoFinder output from all 47 species
Gb_05280 JAS1, JAZ10, TIFY9 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_19069 TIFY10B, JAZ2 transcription factor (TIFY) 0.03 OrthoFinder output from all 47 species
LOC_Os10g25290.1 TIFY10B, JAZ2,... transcription factor (TIFY) 0.02 OrthoFinder output from all 47 species
MA_19887g0010 JAZ4, TIFY6A transcription factor (TIFY) 0.02 OrthoFinder output from all 47 species
Ore_g15926 JAI3, JAZ3, TIFY6B TIFY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g39408 No alias TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR018467 CCT_CS 60 79
No external refs found!