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  5. Als_g42521

Als_g42521


Description : component *(eS8) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0000906 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000906_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g42521
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
AT5G20290 No alias Ribosomal protein S8e family protein 0.02 OrthoFinder output from all 47 species
Adi_g114367 No alias component *(eS8) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Aop_g32909 No alias component *(eS8) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020610.79 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
LOC_Os02g28810.1 LOC_Os02g28810 40S ribosomal protein S8 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Lfl_g22796 No alias component *(eS8) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
MA_9738483g0010 No alias component RPS8 of SSU proteome 0.02 OrthoFinder output from all 47 species
Mp2g16300.1 No alias component RPS8 of SSU proteome 0.02 OrthoFinder output from all 47 species
Pp3c13_20020V3.1 Pp3c13_20020 Ribosomal protein S8e family protein 0.01 OrthoFinder output from all 47 species
Pp3c4_11370V3.1 Pp3c4_11370 Ribosomal protein S8e family protein 0.02 OrthoFinder output from all 47 species
Sam_g27314 No alias component *(eS8) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Solyc06g007570.3.1 Solyc06g007570 component RPS8 of SSU proteome 0.03 OrthoFinder output from all 47 species
Solyc10g006070.3.1 Solyc10g006070 component RPS8 of SSU proteome 0.02 OrthoFinder output from all 47 species
Spa_g53727 No alias component *(eS8) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Zm00001e004092_P002 Zm00001e004092 component RPS8 of SSU proteome 0.02 OrthoFinder output from all 47 species
Zm00001e024995_P001 Zm00001e024995 component RPS8 of SSU proteome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0008198 ferrous iron binding IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
InterPro domains Description Start Stop
IPR022309 Ribosomal_S8e/biogenesis_NSA2 2 164
No external refs found!