Aliases : UGE5
Description : EC_5.1 racemase or epimerase & original description: none
Gene families : OG0000465 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000465_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pnu_g14561 | |
| Cluster | HCCA: Cluster_66 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aop_g04467 | MUR4, UXE1, HSR8 | EC_5.1 racemase or epimerase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g21874 | UGE5 | EC_5.1 racemase or epimerase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_113087g0010 | REB1, UGE4, RHD1 | UDP-glucose 4-epimerase GEPI48 OS=Cyamopsis... | 0.02 | OrthoFinder output from all 47 species | |
| MA_28209g0010 | MUR4, UXE1, HSR8 | UDP-D-xylose 4-epimerase | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g04494 | UGE5 | EC_5.1 racemase or epimerase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g44408 | UGE5 | EC_5.1 racemase or epimerase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc12g006410.3.1 | MUR4, UXE1,... | UDP-D-xylose 4-epimerase | 0.02 | OrthoFinder output from all 47 species | |
| Solyc12g055930.3.1 | UGE2, ATUGE2,... | UDP-D-glucose 4-epimerase | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e038369_P001 | MUR4, UXE1,... | UDP-D-xylose 4-epimerase | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001522 | pseudouridine synthesis | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0004519 | endonuclease activity | IEP | HCCA |
| MF | GO:0004521 | endoribonuclease activity | IEP | HCCA |
| MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
| MF | GO:0005215 | transporter activity | IEP | HCCA |
| BP | GO:0005996 | monosaccharide metabolic process | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| BP | GO:0019321 | pentose metabolic process | IEP | HCCA |
| BP | GO:0019566 | arabinose metabolic process | IEP | HCCA |
| MF | GO:0019842 | vitamin binding | IEP | HCCA |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | HCCA |
| MF | GO:0022857 | transmembrane transporter activity | IEP | HCCA |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
| MF | GO:0030515 | snoRNA binding | IEP | HCCA |
| BP | GO:0042254 | ribosome biogenesis | IEP | HCCA |
| BP | GO:0044085 | cellular component biogenesis | IEP | HCCA |
| BP | GO:0046373 | L-arabinose metabolic process | IEP | HCCA |
| MF | GO:0046556 | alpha-L-arabinofuranosidase activity | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0055085 | transmembrane transport | IEP | HCCA |
| MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR016040 | NAD(P)-bd_dom | 20 | 344 |
| No external refs found! |
